RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SRCIN1Q9C0H9 1055 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 CARS2Q9HA77 564 aaKnown RBP7.72□□□□□ -1.17
PMS1-202ENST00000374826 SEMA3GQ9NS98 782 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 PPM1HQ9ULR3 514 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
PMS1-202ENST00000374826 SLITRK5O94991 958 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 TSPAN15O95858 294 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 TMEM67Q5HYA8 995 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 FBF1Q8TES7 1133 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 KIRREL1Q96J84 757 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 PPP1R16BQ96T49 567 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 OSBPL7Q9BZF2 842 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 ATP13A1Q9HD20 1204 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 CYP8B1Q9UNU6 501 aa7.71□□□□□ -1.18
PMS1-202ENST00000374826 PRR33A8MZF0 331 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 FAM155AB1AL88 458 aaPredicted RBP7.7□□□□□ -1.18
PMS1-202ENST00000374826 FBXO24O75426 580 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 INPP5AQ14642 412 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 SYDE1Q6ZW31 735 aaPredicted RBP7.7□□□□□ -1.18
PMS1-202ENST00000374826 NPAS4Q8IUM7 802 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 ANKRD24Q8TF21 1146 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 ELMO3Q96BJ8 720 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 C19orf73Q9NVV2 129 aa7.7□□□□□ -1.18
PMS1-202ENST00000374826 ZNF865P0CJ78 1059 aaPredicted RBP7.69□□□□□ -1.18
PMS1-202ENST00000374826 GDNFP39905 211 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 ATP2B2Q01814 1243 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 CDKAL1Q5VV42 579 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 MPZL3Q6UWV2 235 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 C22orf34Q6ZV56 151 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 SETDB2Q96T68 719 aa7.69□□□□□ -1.18
PMS1-202ENST00000374826 GIPC1O14908 333 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 SLBPQ14493 270 aaKnown RBP eCLIP7.68□□□□□ -1.18
PMS1-202ENST00000374826 SFRP5Q5T4F7 317 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
PMS1-202ENST00000374826 ANKLE2Q86XL3 938 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 ZSCAN18Q8TBC5 510 aaPredicted RBP7.68□□□□□ -1.18
PMS1-202ENST00000374826 FBRSQ9HAH7 460 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 TPX2Q9ULW0 747 aaKnown RBP7.68□□□□□ -1.18
PMS1-202ENST00000374826 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
PMS1-202ENST00000374826 THOC2Q8NI27 1593 aaKnown RBP7.67□□□□□ -1.18
PMS1-202ENST00000374826 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 P4HBP07237 508 aaKnown RBP7.67□□□□□ -1.18
PMS1-202ENST00000374826 PTPN11Q06124 597 aaPredicted RBP7.67□□□□□ -1.18
PMS1-202ENST00000374826 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 SIAH1Q8IUQ4 282 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 MFSD4AQ8N468 514 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 MFSD2AQ8NA29 543 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 RIN3Q8TB24 985 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 ERCC6Q03468 1493 aa7.67□□□□□ -1.18
PMS1-202ENST00000374826 KRT1P04264 644 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 CAP2P40123 477 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 FGD1P98174 961 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 PCNX4Q63HM2 1172 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 LCNL1Q6ZST4 164 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 HDXQ7Z353 690 aa7.66□□□□□ -1.18
PMS1-202ENST00000374826 LRRC56Q8IYG6 542 aaPredicted RBP7.66□□□□□ -1.18
PMS1-202ENST00000374826 PRAMEF27A3QJZ7 478 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 H3BS24 57 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 NKG7Q16617 165 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 PLPPR2Q96GM1 343 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 CCDC120Q96HB5 630 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 MIPEPQ99797 713 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 SPG7Q9UQ90 795 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 CAPN6Q9Y6Q1 641 aa7.65□□□□□ -1.18
PMS1-202ENST00000374826 LDHBP07195 334 aaKnown RBP7.64□□□□□ -1.19
PMS1-202ENST00000374826 CELA3AP09093 270 aa7.64□□□□□ -1.19
PMS1-202ENST00000374826 THAP5Q7Z6K1 395 aa7.64□□□□□ -1.19
PMS1-202ENST00000374826 FBXO15Q8NCQ5 510 aaPredicted RBP7.64□□□□□ -1.19
PMS1-202ENST00000374826 UBE2FQ969M7 185 aa7.64□□□□□ -1.19
PMS1-202ENST00000374826 SNCAIPQ9Y6H5 919 aa7.64□□□□□ -1.19
PMS1-202ENST00000374826 CBX7O95931 251 aa7.63□□□□□ -1.19
PMS1-202ENST00000374826 ZSCAN22P10073 491 aaPredicted RBP7.63□□□□□ -1.19
PMS1-202ENST00000374826 LETMD1Q6P1Q0 360 aa7.63□□□□□ -1.19
PMS1-202ENST00000374826 HID1Q8IV36 788 aa7.63□□□□□ -1.19
PMS1-202ENST00000374826 DIRC2Q96SL1 478 aa7.63□□□□□ -1.19
PMS1-202ENST00000374826 C12orf49Q9H741 205 aa7.63□□□□□ -1.19
PMS1-202ENST00000374826 CFTRP13569 1480 aa7.62□□□□□ -1.19
PMS1-202ENST00000374826 CADPSQ9ULU8 1353 aa7.62□□□□□ -1.19
PMS1-202ENST00000374826 NFIBO00712 420 aa7.62□□□□□ -1.19
PMS1-202ENST00000374826 ETF1P62495 437 aaKnown RBP7.62□□□□□ -1.19
PMS1-202ENST00000374826 ZNF746Q6NUN9 644 aaPredicted RBP7.62□□□□□ -1.19
PMS1-202ENST00000374826 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.62□□□□□ -1.19
PMS1-202ENST00000374826 ALPK1Q96QP1 1244 aa7.62□□□□□ -1.19
PMS1-202ENST00000374826 NSUN3Q9H649 340 aaKnown RBP7.62□□□□□ -1.19
PMS1-202ENST00000374826 ZSWIM5Q9P217 1185 aa7.62□□□□□ -1.19
PMS1-202ENST00000374826 ANKRD33BA6NCL7 494 aa7.61□□□□□ -1.19
PMS1-202ENST00000374826 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
PMS1-202ENST00000374826 CDK8P49336 464 aa7.61□□□□□ -1.19
PMS1-202ENST00000374826 SV2BQ7L1I2 683 aa7.61□□□□□ -1.19
PMS1-202ENST00000374826 TTC6Q86TZ1 520 aa7.61□□□□□ -1.19
PMS1-202ENST00000374826 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
PMS1-202ENST00000374826 RBAK-RBAKDNI3L0D1 243 aa7.6□□□□□ -1.19
PMS1-202ENST00000374826 USP17L7P0C7H9 530 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms