RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 KIAA0825Q8IV33 1275 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 AMOTL1Q8IY63 956 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
CXCL12-203ENST00000374429 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 SERPINB2P05120 415 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 TNNT1P13805 278 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 PLCD1P51178 756 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 LRRC47Q8N1G4 583 aaKnown RBP12.39□□□□□ -0.43
CXCL12-203ENST00000374429 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 ZSWIM4Q9H7M6 989 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
CXCL12-203ENST00000374429 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 KIF20AO95235 890 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 XBP1P17861 261 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 NOSTRINQ8IVI9 506 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-203ENST00000374429 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
CXCL12-203ENST00000374429 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 SNAP25P60880 206 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 SHC4Q6S5L8 630 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-203ENST00000374429 WNT7AO00755 349 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 APBA3O96018 575 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 ZNF771Q7L3S4 317 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-203ENST00000374429 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-203ENST00000374429 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 FANCLQ9NW38 375 aa12.38□□□□□ -0.43
CXCL12-203ENST00000374429 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 TPM4P67936 248 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 PDE4BQ07343 736 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 ZNF384Q8TF68 577 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 GJA10Q969M2 543 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 ZHX3Q9H4I2 956 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-203ENST00000374429 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 UBASH3AP57075 661 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-203ENST00000374429 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
CXCL12-203ENST00000374429 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-203ENST00000374429 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
CXCL12-203ENST00000374429 FUCA2Q9BTY2 467 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CXCL12-203ENST00000374429 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 SLC16A2P36021 539 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 GPSM2P81274 684 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 UBE4AQ14139 1066 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 CNPY4Q8N129 248 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 MRC1P22897 1456 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 BTDP43251 543 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 JCADQ9P266 1359 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
CXCL12-203ENST00000374429 ADKP55263 362 aaKnown RBP12.36□□□□□ -0.43
CXCL12-203ENST00000374429 ELP1O95163 1332 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 INF2Q27J81 1249 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 BRAPQ7Z569 592 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 PNMA1Q8ND90 353 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 DPF2Q92785 391 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
CXCL12-203ENST00000374429 GNAT2P19087 354 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 PTGDRQ13258 359 aa12.35□□□□□ -0.43
CXCL12-203ENST00000374429 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
CXCL12-203ENST00000374429 CCDC194A0A1B0GVG4 234 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 DEXIO95424 95 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 ST5P78524 1137 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 CCDC94Q9BW85 323 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 337.2 ms