RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 FAM155AB1AL88 458 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-201ENST00000373667 ZNF213O14771 459 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 JAG1P78504 1218 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 PDE4BQ07343 736 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 ABCB5Q2M3G0 1257 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 ZNF287Q9HBT7 754 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-201ENST00000373667 TAOK2Q9UL54 1235 aa22.6■■□□□ 1.21
COL16A1-201ENST00000373667 SPDYE5A6NIY4 337 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 PRDM1O75626 825 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 GH2P01242 217 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 PTPRAP18433 802 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 GJA5P36382 358 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 NOGQ13253 232 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 SHROOM1Q2M3G4 852 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-201ENST00000373667 CCDC84Q86UT8 332 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-201ENST00000373667 ZHX2Q9Y6X8 837 aa22.59■■□□□ 1.21
COL16A1-201ENST00000373667 ZMYM6O95789 1325 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 ASNSP08243 561 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 KIF23Q02241 960 aaPredicted RBP22.58■■□□□ 1.21
COL16A1-201ENST00000373667 PPATQ06203 517 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 ZNF444Q8N0Y2 327 aaPredicted RBP22.58■■□□□ 1.21
COL16A1-201ENST00000373667 INCENPQ9NQS7 918 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 ANAPC4Q9UJX5 808 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 ZBTB21Q9ULJ3 1066 aa22.58■■□□□ 1.21
COL16A1-201ENST00000373667 USP17L5A8MUK1 530 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 ZBTB48P10074 688 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-201ENST00000373667 RAB3GAP1Q15042 981 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 IMMTQ16891 758 aaKnown RBP22.57■■□□□ 1.2
COL16A1-201ENST00000373667 CCDC17Q96LX7 622 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 ZIC5Q96T25 663 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 TOMM22Q9NS69 142 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 GINM1Q9NU53 330 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 U3KPZ7 1027 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-201ENST00000373667 LAMB1P07942 1786 aa22.57■■□□□ 1.2
COL16A1-201ENST00000373667 DOCK1Q14185 1865 aa22.56■■□□□ 1.2
COL16A1-201ENST00000373667 ROBO3Q96MS0 1386 aa22.56■■□□□ 1.2
COL16A1-201ENST00000373667 AKR1B1P15121 316 aa22.56■■□□□ 1.2
COL16A1-201ENST00000373667 PPIL2Q13356 520 aa22.56■■□□□ 1.2
COL16A1-201ENST00000373667 MAP4K1Q92918 833 aa22.56■■□□□ 1.2
COL16A1-201ENST00000373667 LSG1Q9H089 658 aaKnown RBP22.56■■□□□ 1.2
COL16A1-201ENST00000373667 MYH8P13535 1937 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 ATAD5Q96QE3 1844 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 RASA1P20936 1047 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 MAP2K2P36507 400 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 SEPT2Q15019 361 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 RRP12Q5JTH9 1297 aaKnown RBP22.55■■□□□ 1.2
COL16A1-201ENST00000373667 AS3MTQ9HBK9 375 aa22.55■■□□□ 1.2
COL16A1-201ENST00000373667 IRF6O14896 467 aa22.54■■□□□ 1.2
COL16A1-201ENST00000373667 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
COL16A1-201ENST00000373667 RBM8AQ9Y5S9 174 aaKnown RBP22.54■■□□□ 1.2
COL16A1-201ENST00000373667 MANSC4A6NHS7 340 aaPredicted RBP22.53■■□□□ 1.2
COL16A1-201ENST00000373667 TRIM75PA6NK02 468 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 SPP2Q13103 211 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 FAM47AQ5JRC9 791 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 AKNAD1Q5T1N1 836 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 TMEM179Q6ZVK1 233 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 AFG3L2Q9Y4W6 797 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 TACC3Q9Y6A5 838 aa22.53■■□□□ 1.2
COL16A1-201ENST00000373667 RANBP6O60518 1105 aaKnown RBP22.52■■□□□ 1.2
COL16A1-201ENST00000373667 TSPY3P0CV98 308 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 TSPY8P0CW00 308 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 GTF2A2P52657 109 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 TFAP4Q01664 338 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 SNAPC2Q13487 334 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 ZNF280CQ8ND82 737 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 NBPF3Q9H094 633 aa22.52■■□□□ 1.2
COL16A1-201ENST00000373667 RNF41Q9H4P4 317 aaPredicted RBP22.52■■□□□ 1.2
COL16A1-201ENST00000373667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL16A1-201ENST00000373667 CCL15-CCL14A0A0B4J2E2 113 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 CXCL11O14625 94 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 GUCY1A2P33402 732 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 ATP2B2Q01814 1243 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 CCL15Q16663 113 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 STAG1Q8WVM7 1258 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 TBC1D2Q9BYX2 928 aa22.51■■□□□ 1.19
COL16A1-201ENST00000373667 TSPY2A6NKD2 308 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 ORC4O43929 436 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 CETPP11597 493 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 INHBEP58166 350 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 WDR18Q9BV38 432 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 KCNH4Q9UQ05 1017 aa22.5■■□□□ 1.19
COL16A1-201ENST00000373667 REC8O95072 547 aa22.49■■□□□ 1.19
COL16A1-201ENST00000373667 CYP21A2P08686 494 aa22.49■■□□□ 1.19
COL16A1-201ENST00000373667 GADL1Q6ZQY3 521 aa22.49■■□□□ 1.19
COL16A1-201ENST00000373667 REM2Q8IYK8 340 aaPredicted RBP22.49■■□□□ 1.19
COL16A1-201ENST00000373667 MS4A4AQ96JQ5 239 aa22.49■■□□□ 1.19
COL16A1-201ENST00000373667 FEZ1Q99689 392 aa22.49■■□□□ 1.19
COL16A1-201ENST00000373667 USP17L10C9JJH3 530 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 FGRP09769 529 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 PCP11498 1178 aaKnown RBP22.48■■□□□ 1.19
COL16A1-201ENST00000373667 ZYXQ15942 572 aaKnown RBP22.48■■□□□ 1.19
COL16A1-201ENST00000373667 CLEC10AQ8IUN9 316 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 NEDD1Q8NHV4 660 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 ACER1Q8TDN7 264 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 BRI3BPQ8WY22 251 aa22.48■■□□□ 1.19
COL16A1-201ENST00000373667 KANSL2Q9H9L4 492 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms