RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 BRD3Q15059 726 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 NCAPH2Q6IBW4 605 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 PRDM1O75626 825 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 MMP1P03956 469 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
VPS26A-202ENST00000373382 PDE6AP16499 860 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 PTPREP23469 700 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 PLCD1P51178 756 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 CEP112Q8N8E3 955 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 GREM2Q9H772 168 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 GUCA1BQ9UMX6 200 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 SYNRGQ9UMZ2 1314 aa20.18■□□□□ 0.82
VPS26A-202ENST00000373382 ENC1O14682 589 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 ITGA6P23229 1130 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 FXR1P51114 621 aaKnown RBP eCLIP20.17■□□□□ 0.82
VPS26A-202ENST00000373382 TMEM87BQ96K49 555 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 ERICH2A1L162 156 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 CTAGE15A4D2H0 777 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 CTAGE8P0CG41 777 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 CTAGE6Q86UF2 777 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 CTAGE4Q8IX94 777 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 UBXN6Q9BZV1 441 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 CTNND2Q9UQB3 1225 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
VPS26A-202ENST00000373382 ACTN2P35609 894 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 BEND6Q5SZJ8 279 aaPredicted RBP20.17■□□□□ 0.82
VPS26A-202ENST00000373382 MFSD6Q6ZSS7 791 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 EXOC4Q96A65 974 aa20.17■□□□□ 0.82
VPS26A-202ENST00000373382 ZMYND10O75800 440 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 WTAPQ15007 396 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 GOLGA5Q8TBA6 731 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 TFR2Q9UP52 801 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 RRP15Q9Y3B9 282 aaKnown RBP20.16■□□□□ 0.82
VPS26A-202ENST00000373382 RILPL1Q5EBL4 403 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 NOA1Q8NC60 698 aaKnown RBP20.16■□□□□ 0.82
VPS26A-202ENST00000373382 CAPZA3Q96KX2 299 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 TAB2Q9NYJ8 693 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 IQSEC3Q9UPP2 1182 aaPredicted RBP20.16■□□□□ 0.82
VPS26A-202ENST00000373382 C5P01031 1676 aa20.16■□□□□ 0.82
VPS26A-202ENST00000373382 ZNF174Q15697 407 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 EEF2KMTQ96G04 330 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 TRIM10Q9UDY6 481 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.15■□□□□ 0.82
VPS26A-202ENST00000373382 WASF1Q92558 559 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 A0A087X0B3 334 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 A0A1B0GTH6 734 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 FMNL1O95466 1100 aaPredicted RBP20.15■□□□□ 0.82
VPS26A-202ENST00000373382 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 TSPYL1Q9H0U9 437 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 RABEP2Q9H5N1 569 aa20.15■□□□□ 0.82
VPS26A-202ENST00000373382 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.82
VPS26A-202ENST00000373382 ACTN4O43707 911 aaKnown RBP20.14■□□□□ 0.82
VPS26A-202ENST00000373382 MYO1BO43795 1136 aa20.14■□□□□ 0.82
VPS26A-202ENST00000373382 TOM1L2Q6ZVM7 507 aa20.14■□□□□ 0.82
VPS26A-202ENST00000373382 CASP8Q14790 479 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 SART3Q15020 963 aaKnown RBP20.14■□□□□ 0.81
VPS26A-202ENST00000373382 NAPGQ99747 312 aaPredicted RBP20.14■□□□□ 0.81
VPS26A-202ENST00000373382 A0A0G2JS52 829 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 MFAP3LO75121 409 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 SPATA1Q5VX52 437 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 RRAGBQ5VZM2 374 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
VPS26A-202ENST00000373382 PANX2Q96RD6 677 aa20.14■□□□□ 0.81
VPS26A-202ENST00000373382 GOLGA6L1Q8N7Z2 621 aa20.13■□□□□ 0.81
VPS26A-202ENST00000373382 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
VPS26A-202ENST00000373382 HDAC6Q9UBN7 1215 aa20.13■□□□□ 0.81
VPS26A-202ENST00000373382 FAM237AA0A1B0GTK4 181 aa20.13■□□□□ 0.81
VPS26A-202ENST00000373382 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
VPS26A-202ENST00000373382 TRIM75PA6NK02 468 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 MAP2K7O14733 419 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 GYPCP04921 128 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 IFNAR1P17181 557 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SARSP49591 514 aaKnown RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 RNF225M0QZC1 329 aaPredicted RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SRGAP2O75044 1071 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 KRT9P35527 623 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 KANK3Q6NY19 840 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 GPIHBP1Q8IV16 184 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SRPRBQ9Y5M8 271 aaKnown RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 TACC3Q9Y6A5 838 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 NOM1Q5C9Z4 860 aaKnown RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 EARS2Q5JPH6 523 aaKnown RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SRLQ86TD4 932 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 ADD3Q9UEY8 706 aaKnown RBP20.12■□□□□ 0.81
VPS26A-202ENST00000373382 CEP131Q9UPN4 1083 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
VPS26A-202ENST00000373382 SMIM22K7EJ46 135 aa20.11■□□□□ 0.81
VPS26A-202ENST00000373382 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
VPS26A-202ENST00000373382 RIN2Q8WYP3 895 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms