RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 C8orf76Q96K31 380 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 METTL14Q9HCE5 456 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 CLIP2Q9UDT6 1046 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 AKAP2Q9Y2D5 859 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 BCL9O00512 1426 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 DOT1LQ8TEK3 1739 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 RANBP6O60518 1105 aaKnown RBP7.4□□□□□ -1.22
CHD6-202ENST00000373222 PDE8BO95263 885 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 PDE6AP16499 860 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
CHD6-202ENST00000373222 TRIM28Q13263 835 aaKnown RBP7.4□□□□□ -1.22
CHD6-202ENST00000373222 RASGRF1Q13972 1273 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 SPECC1Q5M775 1068 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 SUSD4Q5VX71 490 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 C9orf131Q5VYM1 1079 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 RALYLQ86SE5 291 aaKnown RBP7.4□□□□□ -1.22
CHD6-202ENST00000373222 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
CHD6-202ENST00000373222 MIGA1Q8NAN2 632 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 LINC00301Q8NCQ3 95 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 NCOA7Q8NI08 942 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 CLIC6Q96NY7 704 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 ARMT1Q9H993 441 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 SRCAPQ6ZRS2 3230 aa7.4□□□□□ -1.22
CHD6-202ENST00000373222 TCRBV5S4A2TA0A5A2 114 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 ANKRD18BA2A2Z9 1011 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 CPLX1O14810 134 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 KINO60870 393 aaKnown RBP7.4□□□□□ -1.23
CHD6-202ENST00000373222 NUDT7P0C024 238 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 GUCY1A2P33402 732 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 BCAMP50895 628 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 CCDC73Q6ZRK6 1079 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 NLGN1Q8N2Q7 840 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 MAGEB6Q8N7X4 407 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 MORC4Q8TE76 937 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 PLA2G12BQ9BX93 195 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 NHSL1Q5SYE7 1610 aa7.4□□□□□ -1.23
CHD6-202ENST00000373222 MBD4O95243 580 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 ADAMTS2O95450 1211 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 TERF1P54274 439 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 EVCP57679 992 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 KIF23Q02241 960 aaPredicted RBP7.39□□□□□ -1.23
CHD6-202ENST00000373222 STK38Q15208 465 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 RRP12Q5JTH9 1297 aaKnown RBP7.39□□□□□ -1.23
CHD6-202ENST00000373222 ADGRA1Q86SQ6 560 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 TMTC2Q8N394 836 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHD6-202ENST00000373222 SDF4Q9BRK5 362 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 MYH6P13533 1939 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 MYH13Q9UKX3 1938 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 SERPINB4P48594 390 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 GRIN1Q05586 938 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 PTGDRQ13258 359 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 PTPROQ16827 1216 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 HSP90AA4PQ58FG1 418 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 APOA5Q6Q788 366 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 FBXO33Q7Z6M2 555 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 MRPS27Q92552 414 aaKnown RBP7.39□□□□□ -1.23
CHD6-202ENST00000373222 TANGO6Q9C0B7 1094 aa7.39□□□□□ -1.23
CHD6-202ENST00000373222 FAM217BQ9NTX9 383 aaPredicted RBP7.39□□□□□ -1.23
CHD6-202ENST00000373222 hCG_1642624A0A1W2PR95 340 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SH2B2O14492 632 aaPredicted RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SPTLC2O15270 562 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 FOXN1O15353 648 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SLC34A2O95436 690 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ZFYP08048 801 aaPredicted RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 METAP2P50579 478 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD6-202ENST00000373222 STX1AQ16623 288 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 AXDND1Q5T1B0 1012 aaPredicted RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 CCDC181Q5TID7 509 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 TMEM164Q5U3C3 297 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SDE2Q6IQ49 451 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 NBPF11Q86T75 865 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 LCORLQ8N3X6 602 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 STK32AQ8WU08 396 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 DHX38Q92620 1227 aaKnown RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 ZNF396Q96N95 335 aaPredicted RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 STRBPQ96SI9 672 aaKnown RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 ALG1Q9BT22 464 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PDCL3Q9H2J4 239 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 BCL2L12Q9HB09 334 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 TRMT1Q9NXH9 659 aaKnown RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 RTEL1Q9NZ71 1219 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 CTNNA3Q9UI47 895 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ANGEL1Q9UNK9 670 aaKnown RBP7.38□□□□□ -1.23
CHD6-202ENST00000373222 CDHR2Q9BYE9 1310 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 CASZ1Q86V15 1759 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 DOCK2Q92608 1830 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 CYP2D7A0A087X1C5 515 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 GOLGA6L19H0YKK7 550 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 KCNQ2O43526 872 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms