RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
C9orf16-201ENST00000372994 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
C9orf16-201ENST00000372994 PNMA3Q9UL41 463 aa18.16■□□□□ 0.5
C9orf16-201ENST00000372994 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
C9orf16-201ENST00000372994 LOC285556D6RIA3 1793 aa18.16■□□□□ 0.5
C9orf16-201ENST00000372994 C19orf81C9J6K1 198 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 FMNL1O95466 1100 aaPredicted RBP18.15■□□□□ 0.5
C9orf16-201ENST00000372994 HOXD10P28358 340 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 PLCD1P51178 756 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 PABPC4Q13310 644 aaKnown RBP eCLIP18.15■□□□□ 0.54e-29■■■■■ 40.9
C9orf16-201ENST00000372994 UBE3CQ15386 1083 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 SHROOM1Q2M3G4 852 aaPredicted RBP18.15■□□□□ 0.5
C9orf16-201ENST00000372994 SLC9C1Q4G0N8 1177 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 SMCR8Q8TEV9 937 aaPredicted RBP18.15■□□□□ 0.5
C9orf16-201ENST00000372994 ZNF333Q96JL9 665 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 SRRDQ9UH36 339 aa18.15■□□□□ 0.5
C9orf16-201ENST00000372994 USP17L10C9JJH3 530 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 OSBPP22059 807 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 MTMR2Q13614 643 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 SLFNL1Q499Z3 407 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 LCORLQ8N3X6 602 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
C9orf16-201ENST00000372994 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
C9orf16-201ENST00000372994 DDX60LQ5H9U9 1706 aaKnown RBP18.14■□□□□ 0.49
C9orf16-201ENST00000372994 MGAMO43451 1857 aa18.14■□□□□ 0.49
C9orf16-201ENST00000372994 MYH7P12883 1935 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 GH2P01242 217 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 POLR3DP05423 398 aaPredicted RBP18.13■□□□□ 0.49
C9orf16-201ENST00000372994 FCGRTP55899 365 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 GABPAQ06546 454 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 CERKLQ49MI3 558 aaPredicted RBP18.13■□□□□ 0.49
C9orf16-201ENST00000372994 ZSCAN25Q6NSZ9 544 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 ARMT1Q9H993 441 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
C9orf16-201ENST00000372994 POTEFA5A3E0 1075 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
C9orf16-201ENST00000372994 MBD4O95243 580 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 HOXA7P31268 230 aaPredicted RBP18.12■□□□□ 0.49
C9orf16-201ENST00000372994 SHMT1P34896 483 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 GCLCP48506 637 aaPredicted RBP18.12■□□□□ 0.49
C9orf16-201ENST00000372994 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 ASCC2Q9H1I8 757 aaPredicted RBP18.12■□□□□ 0.49
C9orf16-201ENST00000372994 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 RBBP6Q7Z6E9 1792 aaKnown RBP18.12■□□□□ 0.49
C9orf16-201ENST00000372994 NAV1Q8NEY1 1877 aa18.12■□□□□ 0.49
C9orf16-201ENST00000372994 DOCK3Q8IZD9 2030 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 CHGBP05060 677 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 ANKRD13CQ8N6S4 541 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 CRBNQ96SW2 442 aa18.11■□□□□ 0.49
C9orf16-201ENST00000372994 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
C9orf16-201ENST00000372994 PRKAB2O43741 272 aa18.1■□□□□ 0.49
C9orf16-201ENST00000372994 KBTBD3Q8NAB2 608 aa18.1■□□□□ 0.49
C9orf16-201ENST00000372994 SH3TC2Q8TF17 1288 aa18.1■□□□□ 0.49
C9orf16-201ENST00000372994 EMILIN3Q9NT22 766 aa18.1■□□□□ 0.49
C9orf16-201ENST00000372994 EVX2Q03828 476 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 PRKCZQ05513 592 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 USP17L2Q6R6M4 530 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 RAET1EQ8TD07 263 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 C12orf42Q96LP6 360 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 TMEM106CQ9BVX2 250 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 PUS7LQ9H0K6 701 aaKnown RBP18.09■□□□□ 0.49
C9orf16-201ENST00000372994 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
C9orf16-201ENST00000372994 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.49
C9orf16-201ENST00000372994 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.49
C9orf16-201ENST00000372994 CYP2D6P10635 497 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 GRK4P32298 578 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 GUCY1A2P33402 732 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 IRX3P78415 501 aaPredicted RBP18.08■□□□□ 0.48
C9orf16-201ENST00000372994 RAB3GAP1Q15042 981 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 P2RX7Q99572 595 aaKnown RBP18.08■□□□□ 0.48
C9orf16-201ENST00000372994 KIAA1683Q9H0B3 1180 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 SWAP70Q9UH65 585 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 GABRQQ9UN88 632 aa18.08■□□□□ 0.48
C9orf16-201ENST00000372994 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
C9orf16-201ENST00000372994 EN2P19622 333 aaPredicted RBP18.07■□□□□ 0.48
C9orf16-201ENST00000372994 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
C9orf16-201ENST00000372994 AAMPQ13685 434 aa18.07■□□□□ 0.48
C9orf16-201ENST00000372994 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
C9orf16-201ENST00000372994 STRBPQ96SI9 672 aaKnown RBP18.07■□□□□ 0.48
C9orf16-201ENST00000372994 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
C9orf16-201ENST00000372994 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 USP17L21D6R901 530 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 ZFYP08048 801 aaPredicted RBP18.06■□□□□ 0.48
C9orf16-201ENST00000372994 FLT3LGP49771 235 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 USP14P54578 494 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 HERVK_113P62684 666 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 IRF5Q13568 498 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
C9orf16-201ENST00000372994 ERC2O15083 957 aa18.05■□□□□ 0.48
C9orf16-201ENST00000372994 RNF113AO15541 343 aaKnown RBP18.05■□□□□ 0.48
C9orf16-201ENST00000372994 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms