RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 FOXO4P98177 505 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 RAB30Q15771 203 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 ZSCAN29Q8IWY8 852 aaPredicted RBP10□□□□□ -0.81
YIPF3-201ENST00000372417 ZNF280CQ8ND82 737 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 FERMT2Q96AC1 680 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 EDC3Q96F86 508 aaKnown RBP10□□□□□ -0.81
YIPF3-201ENST00000372417 FBXL18Q96ME1 805 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 BUD13Q9BRD0 619 aaKnown RBP eCLIP10□□□□□ -0.81
YIPF3-201ENST00000372417 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 PORCNQ9H237 461 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 TXNRD2Q9NNW7 524 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 USP40Q9NVE5 1235 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 FLRT1Q9NZU1 646 aa10□□□□□ -0.81
YIPF3-201ENST00000372417 COL4A4P53420 1690 aaPredicted RBP9.99□□□□□ -0.81
YIPF3-201ENST00000372417 C5orf42Q9H799 3197 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 ENTPD3O75355 529 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 ADCYAP1R1P41586 468 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 RGS3P49796 1198 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 HERVK_113P62684 666 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 MAP3K10Q02779 954 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 CCDC174Q6PII3 467 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 COG5Q9UP83 839 aa9.99□□□□□ -0.81
YIPF3-201ENST00000372417 TRIOO75962 3097 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 CACNA1BQ00975 2339 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 ST18O60284 1047 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 PQBP1O60828 265 aaKnown RBP9.98□□□□□ -0.81
YIPF3-201ENST00000372417 GLRX3O76003 335 aaKnown RBP9.98□□□□□ -0.81
YIPF3-201ENST00000372417 SLURP2P0DP57 97 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
YIPF3-201ENST00000372417 DIXDC1Q155Q3 683 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 CSPP1Q1MSJ5 1256 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 Q3C1V9 767 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 LMBR1LQ6UX01 489 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 TRPV1Q8NER1 839 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
YIPF3-201ENST00000372417 PAGR1Q9BTK6 254 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 SLC28A3Q9HAS3 691 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 RFX7Q2KHR2 1363 aa9.98□□□□□ -0.81
YIPF3-201ENST00000372417 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
YIPF3-201ENST00000372417 CYBAP13498 195 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 HOXA7P31268 230 aaPredicted RBP9.97□□□□□ -0.81
YIPF3-201ENST00000372417 CYP2C19P33261 490 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 PPIGQ13427 754 aaKnown RBP eCLIP9.97□□□□□ -0.81
YIPF3-201ENST00000372417 TMEM240Q5SV17 173 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 RASIP1Q5U651 963 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 ANO1Q5XXA6 986 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 CCDC146Q8IYE0 955 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 IDI2Q9BXS1 227 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 STK31Q9BXU1 1019 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 OSBPL5Q9H0X9 879 aaPredicted RBP9.97□□□□□ -0.81
YIPF3-201ENST00000372417 AS3MTQ9HBK9 375 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 TMOD4Q9NZQ9 345 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 RBPJLQ9UBG7 517 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 MROH5Q6ZUA9 1318 aa9.97□□□□□ -0.81
YIPF3-201ENST00000372417 SLC15A5A6NIM6 579 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 LRRC41Q15345 812 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 WDR78Q5VTH9 848 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 SLC44A5Q8NCS7 719 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 WDR66Q8TBY9 1149 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
YIPF3-201ENST00000372417 FOCADQ5VW36 1801 aa9.96□□□□□ -0.82
YIPF3-201ENST00000372417 SEPT4O43236 478 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 GTPBP6O43824 516 aaPredicted RBP9.95□□□□□ -0.82
YIPF3-201ENST00000372417 TBC1D12O60347 775 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 TIMP1P01033 207 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 HOXC6P09630 235 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 CCNA1P78396 465 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
YIPF3-201ENST00000372417 MTMR2Q13614 643 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 MFSD5Q6N075 450 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 PSRC1Q6PGN9 363 aaPredicted RBP9.95□□□□□ -0.82
YIPF3-201ENST00000372417 PUS3Q9BZE2 481 aaKnown RBP9.95□□□□□ -0.82
YIPF3-201ENST00000372417 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 IFT57Q9NWB7 429 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 YBX2Q9Y2T7 364 aaKnown RBP9.95□□□□□ -0.82
YIPF3-201ENST00000372417 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
YIPF3-201ENST00000372417 COL11A1P12107 1806 aaPredicted RBP9.94□□□□□ -0.82
YIPF3-201ENST00000372417 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 FAM196BA6NMK8 535 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
YIPF3-201ENST00000372417 ALADP13716 330 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 PTPREP23469 700 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 GNAI1P63096 354 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 FAAP100Q0VG06 881 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 PICALMQ13492 652 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 GRB14Q14449 540 aa9.94□□□□□ -0.82
YIPF3-201ENST00000372417 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
YIPF3-201ENST00000372417 EPHA10Q5JZY3 1008 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms