RNA–Protein interactions for RNA: ENST00000371185.6

NFIA-203, Transcript of nuclear factor I A, humanhuman

TSL 5 BASIC

Gene NFIA, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-203ENST00000371185 MIGA2Q7L4E1 593 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
NFIA-203ENST00000371185 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
NFIA-203ENST00000371185 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
NFIA-203ENST00000371185 APPP05067 770 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 MCCP23508 829 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 TNNI2P48788 182 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 PRKG1Q13976 671 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 CST9Q5W186 159 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 TACC3Q9Y6A5 838 aa12.34□□□□□ -0.43
NFIA-203ENST00000371185 RAD50Q92878 1312 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 USP17L21D6R901 530 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 BRD1O95696 1058 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 ANAPC15P60006 121 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 CUL4AQ13619 759 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
NFIA-203ENST00000371185 DYNLL2Q96FJ2 89 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
NFIA-203ENST00000371185 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 SPTLC3Q9NUV7 552 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
NFIA-203ENST00000371185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.446e-6■□□□□ 10.8
NFIA-203ENST00000371185 CELF2O95319 508 aaKnown RBP12.32□□□□□ -0.44
NFIA-203ENST00000371185 FGAP02671 866 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 GNAT2P19087 354 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 TDO2P48775 406 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 RRP1BQ14684 758 aaKnown RBP12.32□□□□□ -0.44
NFIA-203ENST00000371185 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
NFIA-203ENST00000371185 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
NFIA-203ENST00000371185 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
NFIA-203ENST00000371185 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
NFIA-203ENST00000371185 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
NFIA-203ENST00000371185 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 TAF6LQ9Y6J9 622 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 MINDY4BA8MYZ0 360 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
NFIA-203ENST00000371185 HAND2P61296 217 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 NAPBQ9H115 298 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 ANO2Q9NQ90 1003 aa12.31□□□□□ -0.44
NFIA-203ENST00000371185 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.31□□□□□ -0.44
NFIA-203ENST00000371185 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
NFIA-203ENST00000371185 JAG1P78504 1218 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 GABPAQ06546 454 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 FSTL1Q12841 308 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 PKP1Q13835 747 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 DHX36Q9H2U1 1008 aaKnown RBP12.3□□□□□ -0.44
NFIA-203ENST00000371185 MYH8P13535 1937 aa12.3□□□□□ -0.44
NFIA-203ENST00000371185 CEP350Q5VT06 3117 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 HTRA3P83110 453 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 PPARAQ07869 468 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 ALX1Q15699 326 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 SBK1Q52WX2 424 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 METTL16Q86W50 562 aaKnown RBP12.29□□□□□ -0.44
NFIA-203ENST00000371185 TBC1D10CQ8IV04 446 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 FEZ1Q99689 392 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
NFIA-203ENST00000371185 WDR33Q9C0J8 1336 aaKnown RBP12.29□□□□□ -0.44
NFIA-203ENST00000371185 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 PCNTO95613 3336 aa12.29□□□□□ -0.44
NFIA-203ENST00000371185 ATAD5Q96QE3 1844 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 GOLGA6L6A8MZA4 724 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 PRDM1O75626 825 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 INPP5BP32019 993 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 SHMT1P34896 483 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 COL9A3Q14050 684 aaPredicted RBP12.28□□□□□ -0.44
NFIA-203ENST00000371185 SYCP1Q15431 976 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 SUPT20HL1Q3ZLR7 823 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 EHD4Q9H223 541 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
NFIA-203ENST00000371185 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
NFIA-203ENST00000371185 ANGEL1Q9UNK9 670 aaKnown RBP12.28□□□□□ -0.44
NFIA-203ENST00000371185 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms