RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CRACR2BQ8N4Y2 399 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-202ENST00000368436 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
CKS1B-202ENST00000368436 IDH1O75874 414 aaKnown RBP19.55■□□□□ 0.72
CKS1B-202ENST00000368436 MTMR2Q13614 643 aa19.55■□□□□ 0.72
CKS1B-202ENST00000368436 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
CKS1B-202ENST00000368436 TMED8Q6PL24 325 aaPredicted RBP19.55■□□□□ 0.72
CKS1B-202ENST00000368436 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
CKS1B-202ENST00000368436 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
CKS1B-202ENST00000368436 PAK6Q9NQU5 681 aaPredicted RBP19.55■□□□□ 0.72
CKS1B-202ENST00000368436 SAP30BPQ9UHR5 308 aaKnown RBP19.55■□□□□ 0.72
CKS1B-202ENST00000368436 GJD2Q9UKL4 321 aa19.55■□□□□ 0.72
CKS1B-202ENST00000368436 CEP290O15078 2479 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 SHROOM1Q2M3G4 852 aaPredicted RBP19.54■□□□□ 0.72
CKS1B-202ENST00000368436 DPF3Q92784 378 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 HTATIP2Q9BUP3 242 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 ANTXR1Q9H6X2 564 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 TMOD4Q9NZQ9 345 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 ZBTB21Q9ULJ3 1066 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 EXOC6BQ9Y2D4 811 aa19.54■□□□□ 0.72
CKS1B-202ENST00000368436 USP17L10C9JJH3 530 aa19.53■□□□□ 0.72
CKS1B-202ENST00000368436 GDF11O95390 407 aa19.53■□□□□ 0.72
CKS1B-202ENST00000368436 FXR1P51114 621 aaKnown RBP eCLIP19.53■□□□□ 0.72
CKS1B-202ENST00000368436 TATDN1Q6P1N9 297 aa19.53■□□□□ 0.72
CKS1B-202ENST00000368436 MAGEB6Q8N7X4 407 aa19.53■□□□□ 0.72
CKS1B-202ENST00000368436 P2RX7Q99572 595 aaKnown RBP19.53■□□□□ 0.72
CKS1B-202ENST00000368436 NDUFB9Q9Y6M9 179 aa19.53■□□□□ 0.72
CKS1B-202ENST00000368436 FARP2O94887 1054 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-202ENST00000368436 IRX3P78415 501 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-202ENST00000368436 MAP3K12Q12852 859 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 AACSQ86V21 672 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 MIGA1Q8NAN2 632 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 DEFB118Q96PH6 123 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 CRISPLD2Q9H0B8 497 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 EHD4Q9H223 541 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
CKS1B-202ENST00000368436 USP5P45974 858 aa19.51■□□□□ 0.71
CKS1B-202ENST00000368436 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
CKS1B-202ENST00000368436 RHPN1Q8TCX5 695 aa19.51■□□□□ 0.71
CKS1B-202ENST00000368436 EMILIN3Q9NT22 766 aa19.51■□□□□ 0.71
CKS1B-202ENST00000368436 DDX60LQ5H9U9 1706 aaKnown RBP19.51■□□□□ 0.71
CKS1B-202ENST00000368436 TFRCP02786 760 aaKnown RBP19.5■□□□□ 0.71
CKS1B-202ENST00000368436 MS4A1P11836 297 aa19.5■□□□□ 0.71
CKS1B-202ENST00000368436 HERVK_113P62684 666 aa19.5■□□□□ 0.71
CKS1B-202ENST00000368436 TXNRD2Q9NNW7 524 aa19.5■□□□□ 0.71
CKS1B-202ENST00000368436 GH2P01242 217 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 HMGCRP04035 888 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 USP17L2Q6R6M4 530 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 TTC6Q86TZ1 520 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 GPRC5AQ8NFJ5 357 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 RIOK1Q9BRS2 568 aaKnown RBP19.49■□□□□ 0.71
CKS1B-202ENST00000368436 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.49■□□□□ 0.71
CKS1B-202ENST00000368436 IL1RAPL2Q9NP60 686 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 RBPJLQ9UBG7 517 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 SERPINB13Q9UIV8 391 aa19.49■□□□□ 0.71
CKS1B-202ENST00000368436 NAV1Q8NEY1 1877 aa19.48■□□□□ 0.71
CKS1B-202ENST00000368436 PEX10O60683 326 aa19.48■□□□□ 0.71
CKS1B-202ENST00000368436 TTF1Q15361 905 aaPredicted RBP19.48■□□□□ 0.71
CKS1B-202ENST00000368436 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
CKS1B-202ENST00000368436 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
CKS1B-202ENST00000368436 ALPK3Q96L96 1907 aa19.48■□□□□ 0.71
CKS1B-202ENST00000368436 POTEEQ6S8J3 1075 aa19.47■□□□□ 0.71
CKS1B-202ENST00000368436 CHRDL2Q6WN34 429 aa19.47■□□□□ 0.71
CKS1B-202ENST00000368436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.47■□□□□ 0.71
CKS1B-202ENST00000368436 GTF3C2Q8WUA4 911 aaPredicted RBP19.47■□□□□ 0.71
CKS1B-202ENST00000368436 NR2E3Q9Y5X4 410 aa19.47■□□□□ 0.71
CKS1B-202ENST00000368436 RPTORQ8N122 1335 aa19.47■□□□□ 0.71
CKS1B-202ENST00000368436 XRCC5P13010 732 aaKnown RBP19.46■□□□□ 0.71
CKS1B-202ENST00000368436 PLCD1P51178 756 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 ERVK-9P63128 1117 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 ERVK-24P63145 666 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 TRIM32Q13049 653 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 Q3C1V9 767 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 CLASRPQ8N2M8 674 aaKnown RBP19.46■□□□□ 0.71
CKS1B-202ENST00000368436 ANKLE1Q8NAG6 615 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 TRIB2Q92519 343 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 KIF1BPQ96EK5 621 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 NUDT12Q9BQG2 462 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 PRO3102Q9H379 93 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 HMX1Q9NP08 348 aaPredicted RBP19.46■□□□□ 0.71
CKS1B-202ENST00000368436 ZBTB40Q9NUA8 1239 aa19.46■□□□□ 0.71
CKS1B-202ENST00000368436 MAGEB6P1A0A0J9YX57 407 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 MAPK4P31152 587 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 SHMT1P34896 483 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 CERKLQ49MI3 558 aaPredicted RBP19.45■□□□□ 0.7
CKS1B-202ENST00000368436 SOCS4Q8WXH5 440 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 USP6NLQ92738 828 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
CKS1B-202ENST00000368436 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 TRIOBPQ9H2D6 2365 aa19.45■□□□□ 0.7
CKS1B-202ENST00000368436 HMMRO75330 724 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 PDE6AP16499 860 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 CYP2B6P20813 491 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 GABPAQ06546 454 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 PAWRQ96IZ0 340 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms