RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NOP14P78316 857 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 PDXDC1Q6P996 788 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 IFT122Q9HBG6 1241 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ANO2Q9NQ90 1003 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 STRNO43815 780 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 SNIP1Q8TAD8 396 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CAPSLQ8WWF8 208 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 HELLSQ9NRZ9 838 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 XIAPP98170 497 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 G3BP1Q13283 466 aaKnown RBP eCLIP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ZNF449Q6P9G9 518 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CDH24Q86UP0 819 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ABCB11O95342 1321 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 IQANK1A0A1B0GTG1 560 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 SLF2Q8IX21 1173 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 LRRC43Q8N309 656 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 MAF1Q9H063 256 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TRIM39Q9HCM9 518 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 FERP16591 822 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 RNASE9P60153 205 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 NUP133Q8WUM0 1156 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC42Q96M95 316 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TBK1Q9UHD2 729 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TMCC1O94876 653 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 RAP1GAPP47736 663 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TRIM6Q9C030 488 aaPredicted RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 PDP2Q9P2J9 529 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 DNA2P51530 1060 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC122Q5T0U0 273 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 IP6K2Q9UHH9 426 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 KRT14P02533 472 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TTC39CQ8N584 583 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 LSM14AQ8ND56 463 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 HAUS4Q9H6D7 363 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TSR2Q969E8 191 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC85AQ96PX6 553 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 OSBPL10Q9BXB5 764 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 KLHL14Q9P2G3 628 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 HIP1RO75146 1068 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PLCB3Q01970 1234 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 BAIAP2L1Q9UHR4 511 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC186Q7Z3E2 898 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 SORCS3Q9UPU3 1222 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 RPS6KA5O75582 802 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 SCAF8Q9UPN6 1271 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 O00370 1275 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PPIP5K2O43314 1243 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ETF1P62495 437 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 LAMC2Q13753 1193 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 TLK2Q86UE8 772 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 TOMM70O94826 608 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 INPP5BP32019 993 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 USH1GQ495M9 461 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 IQCGQ9H095 443 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 MINK1Q8N4C8 1332 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 UNC13DQ70J99 1090 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PALB2Q86YC2 1186 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 IFT81Q8WYA0 676 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ATP2A3Q93084 1043 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 MKL2Q9ULH7 1088 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CHMP2BQ9UQN3 213 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ATP10AO60312 1499 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PRR23AA6NEV1 266 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 BIN1O00499 593 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 MFAP3LO75121 409 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 RSL24D1Q9UHA3 163 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PSMC1P62191 440 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 NECAB1Q8N987 351 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CACTINQ8WUQ7 758 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 HOXC6P09630 235 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 HSPA9P38646 679 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 TMEM57Q8N5G2 664 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 STOML1Q9UBI4 398 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ECM2O94769 699 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PARVBQ9HBI1 364 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 SEPT11Q9NVA2 429 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 SPIDRQ14159 915 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PSMD6Q15008 389 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ZWINTO95229 277 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC92Q53HC0 331 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CD2APQ9Y5K6 639 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 URB2Q14146 1524 aaKnown RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 A0A087WWV3 80 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 TJAP1Q5JTD0 557 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC129Q6ZRS4 1044 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ITGB3BPQ13352 177 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ANKRD62A6NC57 917 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 H3BNX3 289 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 MGEA5O60502 916 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 PPP1R7Q15435 360 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 DBN1Q16643 649 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 NBPF14Q5TI25 921 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 OPTNQ96CV9 577 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 SQORQ9Y6N5 450 aa4.17□□□□□ -1.74
SYNE1-207ENST00000367255 U2AF2P26368 475 aaKnown RBP eCLIP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 IRX5P78411 483 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 EZH1Q92800 747 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 ABTB1Q969K4 478 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-207ENST00000367255 DNAJC17Q9NVM6 304 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms