RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 FGAP02671 866 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 IREB2P48200 963 aaKnown RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 RHBDL3P58872 404 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 VGLL4Q14135 290 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 KRT32Q14532 448 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 ALX1Q15699 326 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 CCL15Q16663 113 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 SLC4A8Q2Y0W8 1093 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 SUPT20HL1Q3ZLR7 823 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 SPDYE2Q495Y8 402 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 NOM1Q5C9Z4 860 aaKnown RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 CREB3L3Q68CJ9 461 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 APOBEC3HQ6NTF7 200 aaKnown RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 TGFBRAP1Q8WUH2 860 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 ERO1AQ96HE7 468 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 DCP1AQ9NPI6 582 aaPredicted RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 USP40Q9NVE5 1235 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 CPA4Q9UI42 421 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 NAV1Q8NEY1 1877 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 BTBD19C9JJ37 291 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZNF213O14771 459 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZBTB48P10074 688 aaPredicted RBP8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 PSMA5P28066 241 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 INPP5BP32019 993 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ANP32AP39687 249 aaKnown RBP8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 INHBEP58166 350 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 PICALMQ13492 652 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 NECTIN1Q15223 517 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 CDC42EP5Q6NZY7 148 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ANKRD13AQ8IZ07 590 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZNF333Q96JL9 665 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 MCM9Q9NXL9 1143 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 LAMA4Q16363 1823 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 DDX60LQ5H9U9 1706 aaKnown RBP8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 CENPFP49454 3210 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 HTTP42858 3142 aa8.03□□□□□ -1.12
RNU1-55P-201ENST00000365510 LAMB1P07942 1786 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 IRF6O14896 467 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 NPM3O75607 178 aaKnown RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 WDHD1O75717 1129 aaPredicted RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 CYP21A2P08686 494 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 PCP11498 1178 aaKnown RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 HAND2P61296 217 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 PPARAQ07869 468 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 TRDNQ13061 729 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 TNFAIP1Q13829 316 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 RABEP1Q15276 862 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 RALYLQ86SE5 291 aaKnown RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 MAPKAPK5Q8IW41 473 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 IL27Q8NEV9 243 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 KCNB2Q92953 911 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 IL17RAQ96F46 866 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 TMEM106CQ9BVX2 250 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 IDI2Q9BXS1 227 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 RNF41Q9H4P4 317 aaPredicted RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 PALD1Q9ULE6 856 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 SNX14Q9Y5W7 946 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 SNCAIPQ9Y6H5 919 aa8.02□□□□□ -1.13
RNU1-55P-201ENST00000365510 FOCADQ5VW36 1801 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 ROBO3Q96MS0 1386 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 USP17L21D6R901 530 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 HLA-DOAP06340 250 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 CASTP20810 708 aaKnown RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 TNNI2P48788 182 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 TCP10Q12799 353 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 NFIAQ12857 509 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 TSGA10IPQ3SY00 556 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 SLC9C1Q4G0N8 1177 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 SBK1Q52WX2 424 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 FKBP1CQ5VVH2 108 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 CTR9Q6PD62 1173 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 CHRDL2Q6WN34 429 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 CCDC84Q86UT8 332 aaPredicted RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 TBC1D10CQ8IV04 446 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 RASEFQ8IZ41 740 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 STAG1Q8WVM7 1258 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 DPF3Q92784 378 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 JAKMIP1Q96N16 626 aaKnown RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 OSBPL5Q9H0X9 879 aaPredicted RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 DHX36Q9H2U1 1008 aaKnown RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 ZNF287Q9HBT7 754 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 SAP30BPQ9UHR5 308 aaKnown RBP8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 ANAPC4Q9UJX5 808 aa8.01□□□□□ -1.13
RNU1-55P-201ENST00000365510 ECM29Q5VYK3 1845 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms