RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 CCDC17Q96LX7 622 aa28.91■■■□□ 2.22
ALKAL1-201ENST00000358543 LAMB1P07942 1786 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 GJA5P36382 358 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 PPIL2Q13356 520 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 DOCK1Q14185 1865 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 CNKSR2Q8WXI2 1034 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 TBC1D2Q9BYX2 928 aa28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.9■■■□□ 2.22
ALKAL1-201ENST00000358543 CEP350Q5VT06 3117 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 GDF11O95390 407 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 JAG1P78504 1218 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 PDE4BQ07343 736 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 ABCB5Q2M3G0 1257 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 KIAA1211Q6ZU35 1233 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 REM2Q8IYK8 340 aaPredicted RBP28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 OTUD5Q96G74 571 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 MKNK2Q9HBH9 465 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 ZBTB21Q9ULJ3 1066 aa28.89■■■□□ 2.22
ALKAL1-201ENST00000358543 FGRP09769 529 aa28.88■■■□□ 2.21
ALKAL1-201ENST00000358543 PTH1RQ03431 593 aa28.88■■■□□ 2.21
ALKAL1-201ENST00000358543 MAP4K1Q92918 833 aa28.88■■■□□ 2.21
ALKAL1-201ENST00000358543 CABP5Q9NP86 173 aa28.88■■■□□ 2.21
ALKAL1-201ENST00000358543 ZHX2Q9Y6X8 837 aa28.88■■■□□ 2.21
ALKAL1-201ENST00000358543 USP17L5A8MUK1 530 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 ZNF213O14771 459 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 IRF6O14896 467 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 AOC2O75106 756 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 GH2P01242 217 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 KIF23Q02241 960 aaPredicted RBP28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 KCNH4Q9UQ05 1017 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 AFG3L2Q9Y4W6 797 aa28.87■■■□□ 2.21
ALKAL1-201ENST00000358543 ATAD5Q96QE3 1844 aa28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 PCP11498 1178 aaKnown RBP28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 RASA1P20936 1047 aa28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 CTDSPL2Q05D32 466 aa28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 ZIC5Q96T25 663 aa28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 LSG1Q9H089 658 aaKnown RBP28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 U3KPZ7 1027 aaPredicted RBP28.86■■■□□ 2.21
ALKAL1-201ENST00000358543 THSD7BQ9C0I4 1608 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 MANSC4A6NHS7 340 aaPredicted RBP28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 CXCL11O14625 94 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 GTF2A2P52657 109 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 INHBEP58166 350 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 MKRN3Q13064 507 aaKnown RBP28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 IMMTQ16891 758 aaKnown RBP28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 TMEM179Q6ZVK1 233 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 ZNF444Q8N0Y2 327 aaPredicted RBP28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 STK11IPQ8N1F8 1099 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 JMYQ8N9B5 988 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 WDR18Q9BV38 432 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 AS3MTQ9HBK9 375 aa28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.85■■■□□ 2.21
ALKAL1-201ENST00000358543 MYH8P13535 1937 aa28.84■■■□□ 2.21
ALKAL1-201ENST00000358543 AKR1B1P15121 316 aa28.84■■■□□ 2.21
ALKAL1-201ENST00000358543 SHROOM1Q2M3G4 852 aaPredicted RBP28.84■■■□□ 2.21
ALKAL1-201ENST00000358543 MS4A4AQ96JQ5 239 aa28.84■■■□□ 2.21
ALKAL1-201ENST00000358543 TESPA1A2RU30 521 aaPredicted RBP28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 ORC4O43929 436 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 GUCY1A2P33402 732 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 TM4SF4P48230 202 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 HAND2P61296 217 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 SNAPC2Q13487 334 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 ZNF280CQ8ND82 737 aa28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.83■■■□□ 2.21
ALKAL1-201ENST00000358543 MPHOSPH10O00566 681 aaKnown RBP28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 PRDM1O75626 825 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 SREBF2Q12772 1141 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 AKNAD1Q5T1N1 836 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 STAG1Q8WVM7 1258 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 NBPF3Q9H094 633 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 RNF41Q9H4P4 317 aaPredicted RBP28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 ANO2Q9NQ90 1003 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 PHIPQ8WWQ0 1821 aa28.82■■■□□ 2.2
ALKAL1-201ENST00000358543 NT5C2P49902 561 aa28.81■■■□□ 2.2
ALKAL1-201ENST00000358543 RAB3GAP1Q15042 981 aa28.81■■■□□ 2.2
ALKAL1-201ENST00000358543 MFSD6Q6ZSS7 791 aa28.81■■■□□ 2.2
ALKAL1-201ENST00000358543 CCDC84Q86UT8 332 aaPredicted RBP28.81■■■□□ 2.2
ALKAL1-201ENST00000358543 TACC3Q9Y6A5 838 aa28.81■■■□□ 2.2
ALKAL1-201ENST00000358543 CETPP11597 493 aa28.8■■■□□ 2.2
ALKAL1-201ENST00000358543 MAP2K1Q02750 393 aaPredicted RBP28.8■■■□□ 2.2
ALKAL1-201ENST00000358543 SPP2Q13103 211 aa28.8■■■□□ 2.2
ALKAL1-201ENST00000358543 SEPT2Q15019 361 aa28.8■■■□□ 2.2
ALKAL1-201ENST00000358543 RBM8AQ9Y5S9 174 aaKnown RBP28.8■■■□□ 2.2
ALKAL1-201ENST00000358543 LAMA4Q16363 1823 aa28.79■■■□□ 2.2
ALKAL1-201ENST00000358543 TBC1D10CQ8IV04 446 aa28.79■■■□□ 2.2
ALKAL1-201ENST00000358543 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.79■■■□□ 2.2
ALKAL1-201ENST00000358543 KANSL2Q9H9L4 492 aa28.79■■■□□ 2.2
ALKAL1-201ENST00000358543 INCENPQ9NQS7 918 aa28.79■■■□□ 2.2
ALKAL1-201ENST00000358543 A0A0G2JLL6 359 aaPredicted RBP28.78■■■□□ 2.2
ALKAL1-201ENST00000358543 TRIM75PA6NK02 468 aa28.78■■■□□ 2.2
ALKAL1-201ENST00000358543 PRRT2Q7Z6L0 340 aaPredicted RBP28.78■■■□□ 2.2
ALKAL1-201ENST00000358543 NEDD1Q8NHV4 660 aa28.78■■■□□ 2.2
ALKAL1-201ENST00000358543 PLIN4Q96Q06 1357 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 CCL15-CCL14A0A0B4J2E2 113 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 C19orf81C9J6K1 198 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 CYP21A2P08686 494 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 BACE1P56817 501 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 CCL15Q16663 113 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 SH3D19Q5HYK7 790 aa28.77■■■□□ 2.2
ALKAL1-201ENST00000358543 IGKV6D-41A0A0C4DH26 115 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms