RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 SH3D19Q5HYK7 790 aa24.73■■□□□ 1.55
PPP1CA-202ENST00000358239 LCORLQ8N3X6 602 aa24.73■■□□□ 1.55
PPP1CA-202ENST00000358239 POLR3DP05423 398 aaPredicted RBP24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 PRMT2P55345 433 aa24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 CAP1Q01518 475 aa24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 SMCR8Q8TEV9 937 aaPredicted RBP24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 MCM9Q9NXL9 1143 aa24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 PDE4DIPQ5VU43 2346 aa24.72■■□□□ 1.55
PPP1CA-202ENST00000358239 GDF11O95390 407 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 BCRP11274 1271 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 HMGCS2P54868 508 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 BACE1P56817 501 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 MLLT1Q03111 559 aaPredicted RBP24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 ARMT1Q9H993 441 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 DCP1AQ9NPI6 582 aaPredicted RBP24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 ATP8A2Q9NTI2 1148 aa24.71■■□□□ 1.55
PPP1CA-202ENST00000358239 C19orf81C9J6K1 198 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 ERC2O15083 957 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 MBD4O95243 580 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 HDAC1Q13547 482 aaPredicted RBP24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 KBTBD3Q8NAB2 608 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 SDR42E1Q8WUS8 393 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 GCC1Q96CN9 775 aa24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
PPP1CA-202ENST00000358239 TNRC18O15417 2968 aaPredicted RBP24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 PLCD1P51178 756 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 SOX10P56693 466 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 MTMR2Q13614 643 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 TREML2Q5T2D2 321 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 DDRGK1Q96HY6 314 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 TMOD4Q9NZQ9 345 aa24.69■■□□□ 1.54
PPP1CA-202ENST00000358239 USP17L10C9JJH3 530 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 HOXD10P28358 340 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 JAG1P78504 1218 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 LRRFIP1Q32MZ4 808 aaKnown RBP24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 CERKLQ49MI3 558 aaPredicted RBP24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 AMOTL1Q8IY63 956 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 ARMC5Q96C12 935 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 ARHGAP39Q9C0H5 1083 aa24.68■■□□□ 1.54
PPP1CA-202ENST00000358239 GH2P01242 217 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 ZFYP08048 801 aaPredicted RBP24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 OSBPP22059 807 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 PSMC4P43686 418 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 GABPAQ06546 454 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 ABCB5Q2M3G0 1257 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 NBPF11Q86T75 865 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 CABP5Q9NP86 173 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 SWAP70Q9UH65 585 aa24.67■■□□□ 1.54
PPP1CA-202ENST00000358239 GLRX3O76003 335 aaKnown RBP24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 FMNL1O95466 1100 aaPredicted RBP24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 MX1P20591 662 aa24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 SHMT1P34896 483 aa24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 GCLCP48506 637 aaPredicted RBP24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 FCGRTP55899 365 aa24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 TRIM47Q96LD4 638 aa24.66■■□□□ 1.54
PPP1CA-202ENST00000358239 SHROOM1Q2M3G4 852 aaPredicted RBP24.65■■□□□ 1.54
PPP1CA-202ENST00000358239 SLFNL1Q499Z3 407 aa24.65■■□□□ 1.54
PPP1CA-202ENST00000358239 SLC9C1Q4G0N8 1177 aa24.65■■□□□ 1.54
PPP1CA-202ENST00000358239 TSHZ3Q63HK5 1081 aa24.65■■□□□ 1.54
PPP1CA-202ENST00000358239 PTCH2Q9Y6C5 1203 aa24.65■■□□□ 1.54
PPP1CA-202ENST00000358239 CTGFP29279 349 aa24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 HOXA7P31268 230 aaPredicted RBP24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 FAM110CQ1W6H9 321 aa24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 PI4K2BQ8TCG2 481 aa24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 PUS7LQ9H0K6 701 aaKnown RBP24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 SRRDQ9UH36 339 aa24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 SLC4A4Q9Y6R1 1079 aa24.64■■□□□ 1.54
PPP1CA-202ENST00000358239 RNF113AO15541 343 aaKnown RBP24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 PRKAB2O43741 272 aa24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 RAB3GAP1Q15042 981 aa24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 ANKRD45Q5TZF3 282 aa24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 USP17L2Q6R6M4 530 aa24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 APPBP2Q92624 585 aa24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 ASCC2Q9H1I8 757 aaPredicted RBP24.63■■□□□ 1.53
PPP1CA-202ENST00000358239 CHGBP05060 677 aa24.62■■□□□ 1.53
PPP1CA-202ENST00000358239 USP14P54578 494 aa24.62■■□□□ 1.53
PPP1CA-202ENST00000358239 IRX3P78415 501 aaPredicted RBP24.62■■□□□ 1.53
PPP1CA-202ENST00000358239 FEZ1Q99689 392 aa24.62■■□□□ 1.53
PPP1CA-202ENST00000358239 BRCA2P51587 3418 aa24.62■■□□□ 1.53
PPP1CA-202ENST00000358239 MYPNQ86TC9 1320 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 GREB1LQ9C091 1923 aaPredicted RBP24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 C12orf60Q5U649 245 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 ANKRD13CQ8N6S4 541 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 ZNF333Q96JL9 665 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 C12orf42Q96LP6 360 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 ARPP21Q9UBL0 812 aaPredicted RBP24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 PARP14Q460N5 1801 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 SALL3Q9BXA9 1300 aa24.61■■□□□ 1.53
PPP1CA-202ENST00000358239 GIMAP6Q6P9H5 292 aa24.6■■□□□ 1.53
PPP1CA-202ENST00000358239 OTUD7AQ8TE49 926 aaPredicted RBP24.6■■□□□ 1.53
PPP1CA-202ENST00000358239 STRBPQ96SI9 672 aaKnown RBP24.6■■□□□ 1.53
PPP1CA-202ENST00000358239 KIAA1683Q9H0B3 1180 aa24.6■■□□□ 1.53
PPP1CA-202ENST00000358239 RWDD1Q9H446 243 aaPredicted RBP24.6■■□□□ 1.53
PPP1CA-202ENST00000358239 MYH4Q9Y623 1939 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 USP17L12C9JPN9 530 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 USP17L21D6R901 530 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 CYP2D6P10635 497 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 GNAT2P19087 354 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 TMEM179Q6ZVK1 233 aa24.59■■□□□ 1.53
PPP1CA-202ENST00000358239 RAET1EQ8TD07 263 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms