RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 A0A0G2JMZ2 1700 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 SZT2Q5T011 3432 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
PDGFA-201ENST00000354513 GDF11O95390 407 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 SGPL1O95470 568 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 POTEEQ6S8J3 1075 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 MORF4L1Q9UBU8 362 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 GJD2Q9UKL4 321 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
PDGFA-201ENST00000354513 RANBP2P49792 3224 aaKnown RBP19.42■□□□□ 0.7
PDGFA-201ENST00000354513 ASNSP08243 561 aa19.41■□□□□ 0.7
PDGFA-201ENST00000354513 CYP7A1P22680 504 aa19.41■□□□□ 0.7
PDGFA-201ENST00000354513 GCLCP48506 637 aaPredicted RBP19.41■□□□□ 0.7
PDGFA-201ENST00000354513 BACE1P56817 501 aa19.41■□□□□ 0.7
PDGFA-201ENST00000354513 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
PDGFA-201ENST00000354513 IGSF3O75054 1194 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 FARP2O94887 1054 aaPredicted RBP19.4■□□□□ 0.7
PDGFA-201ENST00000354513 TRIM32Q13049 653 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 FOXP4Q8IVH2 680 aaPredicted RBP19.4■□□□□ 0.7
PDGFA-201ENST00000354513 MIGA1Q8NAN2 632 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 COA7Q96BR5 231 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 CRISPLD2Q9H0B8 497 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 PRO3102Q9H379 93 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 TXNRD2Q9NNW7 524 aa19.4■□□□□ 0.7
PDGFA-201ENST00000354513 TRIOBPQ9H2D6 2365 aa19.39■□□□□ 0.69
PDGFA-201ENST00000354513 HOXA7P31268 230 aaPredicted RBP19.39■□□□□ 0.69
PDGFA-201ENST00000354513 PABPC4Q13310 644 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDGFA-201ENST00000354513 MAGEB6Q8N7X4 407 aa19.39■□□□□ 0.69
PDGFA-201ENST00000354513 DEFB118Q96PH6 123 aa19.39■□□□□ 0.69
PDGFA-201ENST00000354513 IDH1O75874 414 aaKnown RBP19.38■□□□□ 0.69
PDGFA-201ENST00000354513 CHRDL2Q6WN34 429 aa19.38■□□□□ 0.69
PDGFA-201ENST00000354513 CRACR2BQ8N4Y2 399 aaPredicted RBP19.38■□□□□ 0.69
PDGFA-201ENST00000354513 P2RX7Q99572 595 aaKnown RBP19.38■□□□□ 0.69
PDGFA-201ENST00000354513 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
PDGFA-201ENST00000354513 TAOK2Q9UL54 1235 aa19.38■□□□□ 0.69
PDGFA-201ENST00000354513 HERVK_113P62684 666 aa19.37■□□□□ 0.69
PDGFA-201ENST00000354513 EVX2Q03828 476 aa19.37■□□□□ 0.69
PDGFA-201ENST00000354513 TATDN1Q6P1N9 297 aa19.37■□□□□ 0.69
PDGFA-201ENST00000354513 DPF3Q92784 378 aa19.37■□□□□ 0.69
PDGFA-201ENST00000354513 RIOK1Q9BRS2 568 aaKnown RBP19.37■□□□□ 0.69
PDGFA-201ENST00000354513 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.37■□□□□ 0.69
PDGFA-201ENST00000354513 GINM1Q9NU53 330 aa19.37■□□□□ 0.69
PDGFA-201ENST00000354513 USP17L10C9JJH3 530 aa19.36■□□□□ 0.69
PDGFA-201ENST00000354513 AACSQ86V21 672 aa19.36■□□□□ 0.69
PDGFA-201ENST00000354513 DIS3LQ8TF46 1054 aaKnown RBP19.36■□□□□ 0.69
PDGFA-201ENST00000354513 TRIB2Q92519 343 aa19.36■□□□□ 0.69
PDGFA-201ENST00000354513 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
PDGFA-201ENST00000354513 RBM27Q9P2N5 1060 aaKnown RBP19.36■□□□□ 0.69
PDGFA-201ENST00000354513 RBPJLQ9UBG7 517 aa19.36■□□□□ 0.69
PDGFA-201ENST00000354513 ZNF236Q9UL36 1845 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 C19orf81C9J6K1 198 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 GH2P01242 217 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 HMGCRP04035 888 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 HLA-DOAP06340 250 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 MNX1P50219 401 aaPredicted RBP19.35■□□□□ 0.69
PDGFA-201ENST00000354513 IRX3P78415 501 aaPredicted RBP19.35■□□□□ 0.69
PDGFA-201ENST00000354513 SIRT2Q8IXJ6 389 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 HTATIP2Q9BUP3 242 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 EHD4Q9H223 541 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
PDGFA-201ENST00000354513 COL11A1P12107 1806 aaPredicted RBP19.35■□□□□ 0.69
PDGFA-201ENST00000354513 Q3C1V9 767 aa19.34■□□□□ 0.69
PDGFA-201ENST00000354513 RHPN1Q8TCX5 695 aa19.34■□□□□ 0.69
PDGFA-201ENST00000354513 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
PDGFA-201ENST00000354513 PORCNQ9H237 461 aa19.34■□□□□ 0.69
PDGFA-201ENST00000354513 CNMDO75829 334 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 GUCY1A2P33402 732 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 SHMT1P34896 483 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 USP5P45974 858 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 PLCD1P51178 756 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 MAP3K21Q5TCX8 1036 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 ERC1Q8IUD2 1116 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 USP6NLQ92738 828 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 TRIM34Q9BYJ4 488 aa19.33■□□□□ 0.69
PDGFA-201ENST00000354513 GREB1LQ9C091 1923 aaPredicted RBP19.32■□□□□ 0.68
PDGFA-201ENST00000354513 TFRCP02786 760 aaKnown RBP19.32■□□□□ 0.68
PDGFA-201ENST00000354513 ERVK-9P63128 1117 aa19.32■□□□□ 0.68
PDGFA-201ENST00000354513 ERVK-24P63145 666 aa19.32■□□□□ 0.68
PDGFA-201ENST00000354513 USP17L2Q6R6M4 530 aa19.32■□□□□ 0.68
PDGFA-201ENST00000354513 PAWRQ96IZ0 340 aaKnown RBP19.32■□□□□ 0.68
PDGFA-201ENST00000354513 SERPINB13Q9UIV8 391 aa19.32■□□□□ 0.68
PDGFA-201ENST00000354513 TCRBV5S4A2TA0A5A2 114 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 PDE6AP16499 860 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 CYP2B6P20813 491 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 GABPAQ06546 454 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 MAP3K12Q12852 859 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 ACER1Q8TDN7 264 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 RPTORQ8N122 1335 aa19.31■□□□□ 0.68
PDGFA-201ENST00000354513 ZYXQ15942 572 aaKnown RBP19.3■□□□□ 0.68
PDGFA-201ENST00000354513 MORN1Q5T089 497 aa19.3■□□□□ 0.68
PDGFA-201ENST00000354513 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
PDGFA-201ENST00000354513 CAPN2P17655 700 aa19.29■□□□□ 0.68
PDGFA-201ENST00000354513 CCL14Q16627 93 aa19.29■□□□□ 0.68
PDGFA-201ENST00000354513 TMED8Q6PL24 325 aaPredicted RBP19.29■□□□□ 0.68
PDGFA-201ENST00000354513 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms