RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 TAF1P21675 1872 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 GLI3P10071 1580 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 NR1I2O75469 434 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 DPEP1P16444 411 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 TRMT1LQ7Z2T5 733 aaKnown RBP12.8□□□□□ -0.36
SVIP-201ENST00000354193 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 NUP98P52948 1817 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 PLIN2Q99541 437 aa12.8□□□□□ -0.36
SVIP-201ENST00000354193 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
SVIP-201ENST00000354193 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
SVIP-201ENST00000354193 MYSM1Q5VVJ2 828 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 TRIM5Q9C035 493 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 MCM7P33993 719 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 CDK8P49336 464 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 NFIAQ12857 509 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 NIM1KQ8IY84 436 aa12.79□□□□□ -0.36
SVIP-201ENST00000354193 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 NAPAP54920 295 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 DLGAP5Q15398 846 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 DEXIO95424 95 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 ALX1Q15699 326 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 FEZ1Q99689 392 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 SLC16A2P36021 539 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 CRKP46108 304 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 DNAJC25Q9H1X3 360 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 RESTQ13127 1097 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 STAMQ92783 540 aa12.78□□□□□ -0.36
SVIP-201ENST00000354193 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
SVIP-201ENST00000354193 ANO1Q5XXA6 986 aa12.77□□□□□ -0.36
SVIP-201ENST00000354193 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.36
SVIP-201ENST00000354193 LIFRP42702 1097 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 HDAC9Q9UKV0 1011 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
SVIP-201ENST00000354193 AFMP43652 599 aa12.77□□□□□ -0.37
SVIP-201ENST00000354193 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.37
SVIP-201ENST00000354193 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
SVIP-201ENST00000354193 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
SVIP-201ENST00000354193 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
SVIP-201ENST00000354193 C12orf60Q5U649 245 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 ANO6Q4KMQ2 910 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 KCTD1Q719H9 257 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 ADAMTS7Q9UKP4 1686 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 LUZP1Q86V48 1076 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
SVIP-201ENST00000354193 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 MYO1BO43795 1136 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
SVIP-201ENST00000354193 SYKP43405 635 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 SNAP25P60880 206 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 FLT1P17948 1338 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
SVIP-201ENST00000354193 ZNF165P49910 485 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 KIF23Q02241 960 aaPredicted RBP12.75□□□□□ -0.37
SVIP-201ENST00000354193 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 FAM13BQ9NYF5 915 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 CALM1P0DP23 149 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 CALM2P0DP24 149 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 CALM3P0DP25 149 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 PGBD1Q96JS3 809 aa12.75□□□□□ -0.37
SVIP-201ENST00000354193 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
SVIP-201ENST00000354193 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 IFNAR1P17181 557 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 CDC25AP30304 524 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 HOXA10P31260 410 aaPredicted RBP12.74□□□□□ -0.37
SVIP-201ENST00000354193 KRT2P35908 639 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
SVIP-201ENST00000354193 TNNI2P48788 182 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms