RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 TUBE1Q9UJT0 475 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 SASH1O94885 1247 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
MBD1-204ENST00000347968 CDR1P51861 262 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 C11orf91Q3C1V1 193 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 ACCSLQ4AC99 568 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 ZNF483Q8TF39 744 aaPredicted RBP18.32■□□□□ 0.52
MBD1-204ENST00000347968 HDAC7Q8WUI4 952 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 MED15Q96RN5 788 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 VIPAS39Q9H9C1 493 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
MBD1-204ENST00000347968 FSBPO95073 299 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
MBD1-204ENST00000347968 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 HOXC9P31274 260 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 FLT4P35916 1363 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
MBD1-204ENST00000347968 MYBL1P10243 752 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 CMA1P23946 247 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 RBM5P52756 815 aaKnown RBP eCLIP18.31■□□□□ 0.52
MBD1-204ENST00000347968 SLC7A5Q01650 507 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 AMOTL1Q8IY63 956 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 HAUS2Q9NVX0 235 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 UPP2O95045 317 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
MBD1-204ENST00000347968 HDLBPQ00341 1268 aaKnown RBP18.31■□□□□ 0.52
MBD1-204ENST00000347968 TTMPQ5BVD1 217 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
MBD1-204ENST00000347968 SBNO1A3KN83 1393 aa18.31■□□□□ 0.52
MBD1-204ENST00000347968 RNF225M0QZC1 329 aaPredicted RBP18.3■□□□□ 0.52
MBD1-204ENST00000347968 KRT32Q14532 448 aa18.3■□□□□ 0.52
MBD1-204ENST00000347968 CWF19L2Q2TBE0 894 aaKnown RBP18.3■□□□□ 0.52
MBD1-204ENST00000347968 IRAK4Q9NWZ3 460 aa18.3■□□□□ 0.52
MBD1-204ENST00000347968 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
MBD1-204ENST00000347968 KRT14P02533 472 aa18.3■□□□□ 0.52
MBD1-204ENST00000347968 CCT6AP40227 531 aaKnown RBP18.3■□□□□ 0.52
MBD1-204ENST00000347968 ERVK-24P63145 666 aa18.3■□□□□ 0.52
MBD1-204ENST00000347968 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
MBD1-204ENST00000347968 SPDL1Q96EA4 605 aa18.3■□□□□ 0.52
MBD1-204ENST00000347968 RTN2O75298 545 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 ARHGAP25P42331 645 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 AMPD2Q01433 879 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 PPARAQ07869 468 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
MBD1-204ENST00000347968 CALRP27797 417 aaKnown RBP18.29■□□□□ 0.52
MBD1-204ENST00000347968 NAA35Q5VZE5 725 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 HIP1O00291 1037 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 CAND2O75155 1236 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 CASP1P29466 404 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 CRYMQ14894 314 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 B4GALNT4Q76KP1 1039 aa18.29■□□□□ 0.52
MBD1-204ENST00000347968 TSEN2Q8NCE0 465 aaKnown RBP18.29■□□□□ 0.52
MBD1-204ENST00000347968 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 PDE2AO00408 941 aaPredicted RBP18.28■□□□□ 0.52
MBD1-204ENST00000347968 SNCBQ16143 134 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 KCTD19Q17RG1 926 aaPredicted RBP18.28■□□□□ 0.52
MBD1-204ENST00000347968 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
MBD1-204ENST00000347968 SMYD4Q8IYR2 804 aaPredicted RBP18.28■□□□□ 0.52
MBD1-204ENST00000347968 SEC31BQ9NQW1 1179 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 MAN1B1Q9UKM7 699 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 TPX2Q9ULW0 747 aaKnown RBP18.28■□□□□ 0.52
MBD1-204ENST00000347968 YEATS4O95619 227 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 AP1ARQ63HQ0 302 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 RASGRP2Q7LDG7 609 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 AIDAQ96BJ3 306 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 PSMB7Q99436 277 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 SMARCAL1Q9NZC9 954 aa18.28■□□□□ 0.52
MBD1-204ENST00000347968 IRX1P78414 480 aaPredicted RBP18.27■□□□□ 0.52
MBD1-204ENST00000347968 WLSQ5T9L3 541 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 ATL3Q6DD88 541 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
MBD1-204ENST00000347968 VCPKMTQ9H867 229 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 ABCC6O95255 1503 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 RASSF9O75901 435 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
MBD1-204ENST00000347968 NR1I3Q14994 352 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 BEND3Q5T5X7 828 aa18.27■□□□□ 0.52
MBD1-204ENST00000347968 CCNI2Q6ZMN8 369 aaPredicted RBP18.27■□□□□ 0.52
MBD1-204ENST00000347968 KLHL33A6NCF5 533 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 EZRP15311 586 aaKnown RBP18.26■□□□□ 0.51
MBD1-204ENST00000347968 RXRAP19793 462 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 HAND2P61296 217 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 CYB5D1Q6P9G0 228 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 PARP9Q8IXQ6 854 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 CHP1Q99653 195 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 SH3GL2Q99962 352 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 ZNF18P17022 549 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 GRIN1Q05586 938 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.51
MBD1-204ENST00000347968 KCNB1Q14721 858 aa18.26■□□□□ 0.51
MBD1-204ENST00000347968 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms