RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 HOMER1Q86YM7 354 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 SDR42E1Q8WUS8 393 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 DNAI1Q9UI46 699 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 TADA3O75528 432 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 TMEM67Q5HYA8 995 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 AKNAD1Q5T1N1 836 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 TRIM65Q6PJ69 517 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 C8orf76Q96K31 380 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 ANKRD2Q9GZV1 360 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 TAOK2Q9UL54 1235 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
PSPC1-201ENST00000338910 ZMYM6O95789 1325 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 A0A1B0GVL5 298 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 METAP2P50579 478 aaKnown RBP eCLIP21.53■■□□□ 1.04
PSPC1-201ENST00000338910 NDUFA8P51970 172 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 TPM4P67936 248 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 NCAPHQ15003 741 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 TEX35Q5T0J7 233 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
PSPC1-201ENST00000338910 MICU3Q86XE3 530 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 TMEM87BQ96K49 555 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 SRRTQ9BXP5 876 aaKnown RBP21.53■■□□□ 1.04
PSPC1-201ENST00000338910 CCP110O43303 1012 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 APOA5Q6Q788 366 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 MYL10Q9BUA6 226 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 TSPYL1Q9H0U9 437 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 RTEL1Q9NZ71 1219 aa21.53■■□□□ 1.04
PSPC1-201ENST00000338910 MAGEB6P1A0A0J9YX57 407 aa21.52■■□□□ 1.04
PSPC1-201ENST00000338910 IFIT3O14879 490 aaKnown RBP21.52■■□□□ 1.04
PSPC1-201ENST00000338910 FANCGO15287 622 aa21.52■■□□□ 1.04
PSPC1-201ENST00000338910 ATP8B1O43520 1251 aa21.52■■□□□ 1.04
PSPC1-201ENST00000338910 SERPINB2P05120 415 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 FBXO33Q7Z6M2 555 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 ZKSCAN3Q9BRR0 538 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 LY9Q9HBG7 655 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 EFCAB8A8MWE9 144 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 CDC27P30260 824 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 RAD51AP2Q09MP3 1159 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 TXNRD3Q86VQ6 643 aa21.51■■□□□ 1.03
PSPC1-201ENST00000338910 MINDY4BA8MYZ0 360 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 POLR3DP05423 398 aaPredicted RBP21.5■■□□□ 1.03
PSPC1-201ENST00000338910 ZRSR1Q15695 479 aaKnown RBP21.5■■□□□ 1.03
PSPC1-201ENST00000338910 MNS1Q8NEH6 495 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 FBXO18Q8NFZ0 1043 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 KRT23Q9C075 422 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 CNNM2Q9H8M5 875 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 POLR3GO15318 223 aaPredicted RBP21.5■■□□□ 1.03
PSPC1-201ENST00000338910 ZBTB43O43298 467 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 DYNLL1P63167 89 aaKnown RBP21.5■■□□□ 1.03
PSPC1-201ENST00000338910 GRAPQ13588 217 aa21.5■■□□□ 1.03
PSPC1-201ENST00000338910 GRAPLQ8TC17 118 aaPredicted RBP21.5■■□□□ 1.03
PSPC1-201ENST00000338910 HIBADHP31937 336 aaKnown RBP21.49■■□□□ 1.03
PSPC1-201ENST00000338910 NLRP12P59046 1061 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 LINC00301Q8NCQ3 95 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 NEK11Q8NG66 645 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 IPO4Q8TEX9 1081 aaKnown RBP21.49■■□□□ 1.03
PSPC1-201ENST00000338910 ZNF384Q8TF68 577 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 PHKBQ93100 1093 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 FEZ2Q9UHY8 353 aaPredicted RBP21.49■■□□□ 1.03
PSPC1-201ENST00000338910 SMIM22K7EJ46 135 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 SEC31AO94979 1220 aaKnown RBP21.49■■□□□ 1.03
PSPC1-201ENST00000338910 TPM1P09493 284 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 TXLNBQ8N3L3 684 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 STAG1Q8WVM7 1258 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 ANKIB1Q9P2G1 1089 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 JAG2Q9Y219 1238 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
PSPC1-201ENST00000338910 FANCCQ00597 558 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 PPARAQ07869 468 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 RIOK1Q9BRS2 568 aaKnown RBP21.48■■□□□ 1.03
PSPC1-201ENST00000338910 CARD6Q9BX69 1037 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 TMX1Q9H3N1 280 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 SLC12A7Q9Y666 1083 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 SASH3O75995 380 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 TBC1D8O95759 1140 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 SGMS1Q86VZ5 419 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 REXO1L1PQ8IX06 675 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 HSD3B7Q9H2F3 369 aa21.48■■□□□ 1.03
PSPC1-201ENST00000338910 URI1O94763 535 aaPredicted RBP21.47■■□□□ 1.03
PSPC1-201ENST00000338910 APBA3O96018 575 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
PSPC1-201ENST00000338910 LIFRP42702 1097 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 ST5P78524 1137 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 DDR1Q08345 913 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
PSPC1-201ENST00000338910 GOLGA8AA7E2F4 631 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 BIN1O00499 593 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 IKBKBO14920 756 aa21.47■■□□□ 1.03
PSPC1-201ENST00000338910 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-201ENST00000338910 KCNG4Q8TDN1 519 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 SMARCE1Q969G3 411 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 FAM217BQ9NTX9 383 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-201ENST00000338910 ATP1A3P13637 1013 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 ZNF827Q17R98 1081 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 CRY2Q49AN0 593 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 CC2D1AQ6P1N0 951 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms