RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 LIG1P18858 919 aa14.46□□□□□ -0.09
ZNF548-201ENST00000336128 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
ZNF548-201ENST00000336128 CRACR2BQ8N4Y2 399 aaPredicted RBP14.46□□□□□ -0.09
ZNF548-201ENST00000336128 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
ZNF548-201ENST00000336128 PDGFDQ9GZP0 370 aaPredicted RBP14.46□□□□□ -0.09
ZNF548-201ENST00000336128 FOCADQ5VW36 1801 aa14.46□□□□□ -0.1
ZNF548-201ENST00000336128 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.1
ZNF548-201ENST00000336128 GUCY1A2P33402 732 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 CMTR1Q8N1G2 835 aaKnown RBP14.45□□□□□ -0.1
ZNF548-201ENST00000336128 BICD2Q8TD16 824 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 TSPY26PQ9H489 355 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 DBNDD1Q9H9R9 158 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 TTF2Q9UNY4 1162 aaKnown RBP14.45□□□□□ -0.1
ZNF548-201ENST00000336128 PLCD1P51178 756 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 TFAP4Q01664 338 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 MKNK2Q9HBH9 465 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 RBM28Q9NW13 759 aaKnown RBP14.45□□□□□ -0.1
ZNF548-201ENST00000336128 RTEL1Q9NZ71 1219 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
ZNF548-201ENST00000336128 DEXIO95424 95 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 NASPP49321 788 aaPredicted RBP14.44□□□□□ -0.1
ZNF548-201ENST00000336128 TROAPQ12815 778 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 SLC44A5Q8NCS7 719 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 PODNQ7Z5L7 613 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 C7orf43Q8WVR3 580 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 SNED1Q8TER0 1413 aa14.44□□□□□ -0.1
ZNF548-201ENST00000336128 MYH1P12882 1939 aa14.43□□□□□ -0.1
ZNF548-201ENST00000336128 PLEKHA8P1O95397 391 aa14.43□□□□□ -0.1
ZNF548-201ENST00000336128 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
ZNF548-201ENST00000336128 C16orf86Q6ZW13 317 aa14.43□□□□□ -0.1
ZNF548-201ENST00000336128 RNF26Q9BY78 433 aaPredicted RBP14.43□□□□□ -0.1
ZNF548-201ENST00000336128 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
ZNF548-201ENST00000336128 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
ZNF548-201ENST00000336128 ECE2O60344 883 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 YEATS4O95619 227 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 RASA1P20936 1047 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 SCNN1DP51172 638 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 FUT2Q10981 343 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 GNL2Q13823 731 aaKnown RBP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 TMTC3Q6ZXV5 915 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 ZNF444Q8N0Y2 327 aaPredicted RBP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 ANKS1AQ92625 1134 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 IL17RBQ9NRM6 502 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 POLR3EQ9NVU0 708 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 TSPY3P0CV98 308 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 TSPY8P0CW00 308 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 CDK8P49336 464 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 STK38Q15208 465 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 CC2D2BQ6DHV5 1058 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 DGKHQ86XP1 1220 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 CTCFLQ8NI51 663 aaPredicted RBP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
ZNF548-201ENST00000336128 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 KCNQ5Q9NR82 932 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
ZNF548-201ENST00000336128 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
ZNF548-201ENST00000336128 MMP1P03956 469 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 U2AF2P26368 475 aaKnown RBP eCLIP14.41□□□□□ -0.1
ZNF548-201ENST00000336128 FKBP1AP62942 108 aaKnown RBP14.41□□□□□ -0.1
ZNF548-201ENST00000336128 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 HHIPL2Q6UWX4 724 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 TEKT1Q969V4 418 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 CLSTN2Q9H4D0 955 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 KCNJ14Q9UNX9 436 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 MYH6P13533 1939 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 USP17L3A6NCW0 530 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 USP17L4A6NCW7 530 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 ME1P48163 572 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 PICALMQ13492 652 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 SAFBQ15424 915 aaKnown RBP eCLIP14.41□□□□□ -0.1
ZNF548-201ENST00000336128 STRIP1Q5VSL9 837 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 USP17L1Q7RTZ2 530 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 CCAR1Q8IX12 1150 aaKnown RBP14.41□□□□□ -0.1
ZNF548-201ENST00000336128 SUPT20HQ8NEM7 779 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 USP40Q9NVE5 1235 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 SCN9AQ15858 1988 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
ZNF548-201ENST00000336128 NR1I2O75469 434 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 WDHD1O75717 1129 aaPredicted RBP14.4□□□□□ -0.1
ZNF548-201ENST00000336128 PKN1Q16512 942 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 AOC3Q16853 763 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 PCDHA7Q9UN72 937 aa14.4□□□□□ -0.1
ZNF548-201ENST00000336128 CRKP46108 304 aa14.39□□□□□ -0.11
ZNF548-201ENST00000336128 KIAA2012Q0VF49 1180 aa14.39□□□□□ -0.11
ZNF548-201ENST00000336128 SF3A1Q15459 793 aaKnown RBP14.39□□□□□ -0.11
ZNF548-201ENST00000336128 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms