RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 IQCDQ96DY2 449 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 STK24Q9Y6E0 443 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 CIAO1O76071 339 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 MNAT1P51948 309 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 MAPK8IP2Q13387 824 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 SLC9C1Q4G0N8 1177 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 ZMYM1Q5SVZ6 1142 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 SNX29Q8TEQ0 813 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 PCDHA7Q9UN72 937 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 IBSPP21815 317 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 LRRC24Q50LG9 513 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 TBC1D22AQ8WUA7 517 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 TTC14Q96N46 770 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 NAP1L3Q99457 506 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 USP17L12C9JPN9 530 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 USP17L21D6R901 530 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 CCDC26Q8TAB7 109 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 KIF1BO60333 1816 aa19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 CPSF1Q10570 1443 aaKnown RBP19.11■□□□□ 0.65
TRAPPC11-201ENST00000334690 KIF4AO95239 1232 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 ADCY7P51828 1080 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 PNOCQ13519 176 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 CYP21A2P08686 494 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 REXO1Q8N1G1 1221 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 MAGEA1P43355 309 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 TRMT44Q8IYL2 757 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 ANKS4BQ8N8V4 417 aa19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 GABPB1Q06547 395 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC11-201ENST00000334690 CALCOCO2Q13137 446 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 HERC4Q5GLZ8 1057 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 C8orf74Q6P047 294 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 NELFBQ8WX92 580 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 SECISBP2LQ93073 1101 aaKnown RBP19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 RTEL1Q9NZ71 1219 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 PDE8BO95263 885 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 SCRN1Q12765 414 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 NOX5Q96PH1 765 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 CABP7Q86V35 215 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 PRR36Q9H6K5 1346 aa19.09■□□□□ 0.65
TRAPPC11-201ENST00000334690 RGS22Q8NE09 1264 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 ZEB2O60315 1214 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 IGSF3O75054 1194 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 STAMBPO95630 424 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 EEF2P13639 858 aaKnown RBP19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 OTUD6BQ8N6M0 293 aa19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 IQCGQ9H095 443 aaKnown RBP19.08■□□□□ 0.65
TRAPPC11-201ENST00000334690 PCP11498 1178 aaKnown RBP19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 ETF1P62495 437 aaKnown RBP19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 STAMQ92783 540 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 SHROOM2Q13796 1616 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 TNKSO95271 1327 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 hCG_1642624A0A1W2PR95 340 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 A6NNZ2 444 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 SLC1A4P43007 532 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 TUBB8Q3ZCM7 444 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 KRBA2Q6ZNG9 492 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 NUCKS1Q9H1E3 243 aaKnown RBP19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 CEP83Q9Y592 693 aa19.08■□□□□ 0.64
TRAPPC11-201ENST00000334690 PLCB3Q01970 1234 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 ZSCAN10Q96SZ4 725 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 NLRP1Q9C000 1473 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 BTBD18B2RXH4 712 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 NF2P35240 595 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 CALCRLQ16602 461 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 C6orf163Q5TEZ5 329 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 FCHSD1Q86WN1 690 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 MAP3K15Q6ZN16 1313 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 OR8K1Q8NGG5 319 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 ZFP91Q96JP5 570 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 TLDC2A0PJX2 215 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 GSTA5Q7RTV2 222 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 CPLX4Q7Z7G2 160 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 JDP2Q8WYK2 163 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 RPGRIP1Q96KN7 1286 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 ARHGEF10LQ9HCE6 1279 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 ATG3Q9NT62 314 aa19.07■□□□□ 0.64
TRAPPC11-201ENST00000334690 TMEM110-MUSTN1A8MSY1 372 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 ATP2C2O75185 946 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 EIF6P56537 245 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 LRMPQ12912 555 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 PPP1R14CQ8TAE6 165 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 SLF1Q9BQI6 1058 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 CCDC121Q6ZUS5 278 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 TLR7Q9NYK1 1049 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 POLA2Q14181 598 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 MSANTD4Q8NCY6 345 aa19.06■□□□□ 0.64
TRAPPC11-201ENST00000334690 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 ASIC2Q16515 512 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms