RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TBC1D2BQ9UPU7 963 aa26.89■■□□□ 1.89
TSKU-201ENST00000333090 MAP2K7O14733 419 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 MAPK8IP2Q13387 824 aaPredicted RBP26.88■■□□□ 1.89
TSKU-201ENST00000333090 EXOC4Q96A65 974 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 ZKSCAN3Q9BRR0 538 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 CSRNP2Q9H175 543 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 CNNM1Q9NRU3 951 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 TOMM22Q9NS69 142 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 FEZ2Q9UHY8 353 aaPredicted RBP26.88■■□□□ 1.89
TSKU-201ENST00000333090 CDC23Q9UJX2 597 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 RRP12Q5JTH9 1297 aaKnown RBP26.88■■□□□ 1.89
TSKU-201ENST00000333090 KANK3Q6NY19 840 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 STRBPQ96SI9 672 aaKnown RBP26.88■■□□□ 1.89
TSKU-201ENST00000333090 NAPBQ9H115 298 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 PDE11AQ9HCR9 933 aa26.88■■□□□ 1.89
TSKU-201ENST00000333090 CSF1RP07333 972 aa26.87■■□□□ 1.89
TSKU-201ENST00000333090 KIF4BQ2VIQ3 1234 aa26.87■■□□□ 1.89
TSKU-201ENST00000333090 FOXP1Q9H334 677 aaPredicted RBP26.87■■□□□ 1.89
TSKU-201ENST00000333090 SRPRBQ9Y5M8 271 aaKnown RBP26.87■■□□□ 1.89
TSKU-201ENST00000333090 ATRNO75882 1429 aa26.87■■□□□ 1.89
TSKU-201ENST00000333090 PCCAP05165 728 aaPredicted RBP26.87■■□□□ 1.89
TSKU-201ENST00000333090 AFMP43652 599 aa26.87■■□□□ 1.89
TSKU-201ENST00000333090 CEP112Q8N8E3 955 aa26.87■■□□□ 1.89
TSKU-201ENST00000333090 ITGA6P23229 1130 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 SLC20A2Q08357 652 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 APTXQ7Z2E3 356 aaKnown RBP26.86■■□□□ 1.89
TSKU-201ENST00000333090 PNKPQ96T60 521 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 TSPYL1Q9H0U9 437 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 PHKA1P46020 1223 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 RTN1Q16799 776 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 BEND6Q5SZJ8 279 aaPredicted RBP26.86■■□□□ 1.89
TSKU-201ENST00000333090 ZNF579Q8NAF0 562 aaKnown RBP26.86■■□□□ 1.89
TSKU-201ENST00000333090 OXER1Q8TDS5 423 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 NAA15Q9BXJ9 866 aaKnown RBP26.86■■□□□ 1.89
TSKU-201ENST00000333090 GREM2Q9H772 168 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 EPB41L4AQ9HCS5 686 aaPredicted RBP26.86■■□□□ 1.89
TSKU-201ENST00000333090 VPS18Q9P253 973 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 WDR17Q8IZU2 1322 aa26.86■■□□□ 1.89
TSKU-201ENST00000333090 TFRCP02786 760 aaKnown RBP26.85■■□□□ 1.89
TSKU-201ENST00000333090 CASP1P29466 404 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 SPATA20Q8TB22 786 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 CABP5Q9NP86 173 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 SYNRGQ9UMZ2 1314 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 AKAP11Q9UKA4 1901 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 SPATA1Q5VX52 437 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 IFNL3Q8IZI9 196 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 ZBTB38Q8NAP3 1195 aaPredicted RBP26.85■■□□□ 1.89
TSKU-201ENST00000333090 TACC3Q9Y6A5 838 aa26.85■■□□□ 1.89
TSKU-201ENST00000333090 PKD1L3Q7Z443 1732 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 PCDH11XQ9BZA7 1347 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 PCDH11YQ9BZA8 1340 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 CD44P16070 742 aaKnown RBP26.84■■□□□ 1.89
TSKU-201ENST00000333090 CASP14P31944 242 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 SMYD4Q8IYR2 804 aaPredicted RBP26.84■■□□□ 1.89
TSKU-201ENST00000333090 TRIM34Q9BYJ4 488 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 SUGCTQ9HAC7 445 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 CEP131Q9UPN4 1083 aa26.84■■□□□ 1.89
TSKU-201ENST00000333090 TCRBV5S4A2TA0A5A2 114 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 MFAP3LO75121 409 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 RHOXF2BP0C7M4 288 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 HDXQ7Z353 690 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 TTLL11Q8NHH1 800 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 HNRNPLLQ8WVV9 542 aaKnown RBP26.83■■□□□ 1.89
TSKU-201ENST00000333090 RHOXF2Q9BQY4 288 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 PLA2G12BQ9BX93 195 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 ADD3Q9UEY8 706 aaKnown RBP26.83■■□□□ 1.89
TSKU-201ENST00000333090 CTAGE9A4FU28 777 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 GOLGA5Q8TBA6 731 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 PSD3Q9NYI0 1048 aa26.83■■□□□ 1.89
TSKU-201ENST00000333090 MBD4O95243 580 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 RASGRP2Q7LDG7 609 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 SLC35F6Q8N357 371 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 NUP133Q8WUM0 1156 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 EPSTI1Q96J88 318 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 CWC15Q9P013 229 aaKnown RBP26.82■■□□□ 1.88
TSKU-201ENST00000333090 ASAP1Q9ULH1 1129 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 MYO5AQ9Y4I1 1855 aaKnown RBP26.82■■□□□ 1.88
TSKU-201ENST00000333090 A0A087X0B3 334 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 PATL2C9JE40 543 aaKnown RBP26.82■■□□□ 1.88
TSKU-201ENST00000333090 DEXIO95424 95 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 GPTP24298 496 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 AKNAD1Q5T1N1 836 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 WWC2Q6AWC2 1192 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 MFSD6Q6ZSS7 791 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 ACRBPQ8NEB7 543 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 CDC5LQ99459 802 aaKnown RBP26.82■■□□□ 1.88
TSKU-201ENST00000333090 ABCB6Q9NP58 842 aa26.82■■□□□ 1.88
TSKU-201ENST00000333090 ERVV-2B6SEH9 535 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 POTEB2H3BUK9 544 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 ERLIN1O75477 346 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 TRIM28Q13263 835 aaKnown RBP26.81■■□□□ 1.88
TSKU-201ENST00000333090 ZNF512BQ96KM6 892 aaPredicted RBP26.81■■□□□ 1.88
TSKU-201ENST00000333090 ARMT1Q9H993 441 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 RAB21Q9UL25 225 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 PBX1P40424 430 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 EVA1CP58658 441 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 WTAPQ15007 396 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 FILIP1LQ4L180 1135 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 KIF6Q6ZMV9 814 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 CNNM2Q9H8M5 875 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms