RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PNMA3Q9UL41 463 aa17.85■□□□□ 0.45
TSPO-201ENST00000329563 MYCP01106 439 aaPredicted RBP17.84■□□□□ 0.45
TSPO-201ENST00000329563 IGHDP01880 384 aa17.84■□□□□ 0.45
TSPO-201ENST00000329563 EVX2Q03828 476 aa17.84■□□□□ 0.45
TSPO-201ENST00000329563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.84■□□□□ 0.45
TSPO-201ENST00000329563 DCTPP1Q9H773 170 aa17.84■□□□□ 0.45
TSPO-201ENST00000329563 BIN2Q9UBW5 565 aaPredicted RBP17.84■□□□□ 0.45
TSPO-201ENST00000329563 AGTPBP1Q9UPW5 1226 aa17.84■□□□□ 0.45
TSPO-201ENST00000329563 TCRBV5S4A2TA0A5A2 114 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 GOLIM4O00461 696 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 RAB11FIP3O75154 756 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 GDF11O95390 407 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 CHGBP05060 677 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 PDE6AP16499 860 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 HMGCS2P54868 508 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 SLFNL1Q499Z3 407 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
TSPO-201ENST00000329563 ZNF280CQ8ND82 737 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 SLAIN1Q8ND83 568 aa17.83■□□□□ 0.44
TSPO-201ENST00000329563 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
TSPO-201ENST00000329563 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
TSPO-201ENST00000329563 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
TSPO-201ENST00000329563 SMARCA5O60264 1052 aaPredicted RBP17.82■□□□□ 0.44
TSPO-201ENST00000329563 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
TSPO-201ENST00000329563 CAPN2P17655 700 aa17.82■□□□□ 0.44
TSPO-201ENST00000329563 PABPC4Q13310 644 aaKnown RBP eCLIP17.82■□□□□ 0.442e-6■■■■■ 34.6
TSPO-201ENST00000329563 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
TSPO-201ENST00000329563 ZNF532Q9HCE3 1301 aa17.81■□□□□ 0.44
TSPO-201ENST00000329563 SH3D19Q5HYK7 790 aa17.81■□□□□ 0.44
TSPO-201ENST00000329563 HABP4Q5JVS0 413 aaKnown RBP17.81■□□□□ 0.44
TSPO-201ENST00000329563 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
TSPO-201ENST00000329563 PROCA1Q8NCQ7 364 aaPredicted RBP17.81■□□□□ 0.44
TSPO-201ENST00000329563 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
TSPO-201ENST00000329563 GABRQQ9UN88 632 aa17.81■□□□□ 0.44
TSPO-201ENST00000329563 TRIOBPQ9H2D6 2365 aa17.81■□□□□ 0.44
TSPO-201ENST00000329563 TNPO2O14787 897 aaKnown RBP17.8■□□□□ 0.44
TSPO-201ENST00000329563 USP5P45974 858 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 PLCD1P51178 756 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 PRKCZQ05513 592 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 MTMR2Q13614 643 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
TSPO-201ENST00000329563 CRACR2BQ8N4Y2 399 aaPredicted RBP17.8■□□□□ 0.44
TSPO-201ENST00000329563 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 BOLA2Q9H3K6 86 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 AS3MTQ9HBK9 375 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 ZBTB21Q9ULJ3 1066 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 DOCK3Q8IZD9 2030 aa17.8■□□□□ 0.44
TSPO-201ENST00000329563 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 GJB1P08034 283 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 ASNSP08243 561 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 ATP5JP18859 108 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 LCORLQ8N3X6 602 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 ANKRD13CQ8N6S4 541 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 COA7Q96BR5 231 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 HTATIP2Q9BUP3 242 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 TRIM34Q9BYJ4 488 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 RNF208Q9H0X6 261 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
TSPO-201ENST00000329563 PEX10O60683 326 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 CCL5P13501 91 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 GJA8P48165 433 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 GCLCP48506 637 aaPredicted RBP17.78■□□□□ 0.44
TSPO-201ENST00000329563 BACE1P56817 501 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 MTFR1Q15390 333 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
TSPO-201ENST00000329563 PXYLP1Q8TE99 480 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 HAUS7Q99871 368 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 EHD4Q9H223 541 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
TSPO-201ENST00000329563 ADCY3O60266 1144 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 GH2P01242 217 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 SHMT1P34896 483 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 IRF5Q13568 498 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 POTEEQ6S8J3 1075 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 CERS3Q8IU89 383 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
TSPO-201ENST00000329563 ASCC2Q9H1I8 757 aaPredicted RBP17.77■□□□□ 0.44
TSPO-201ENST00000329563 MYH7P12883 1935 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 SMIM22K7EJ46 135 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 PRKAB2O43741 272 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 ADD2P35612 726 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 GABPAQ06546 454 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 GINM1Q9NU53 330 aa17.76■□□□□ 0.43
TSPO-201ENST00000329563 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 CYP2D6P10635 497 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 GUCY1A2P33402 732 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 FLT3LGP49771 235 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 DPF3Q92784 378 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 DCP1AQ9NPI6 582 aaPredicted RBP17.75■□□□□ 0.43
TSPO-201ENST00000329563 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
TSPO-201ENST00000329563 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 NUCB1Q02818 461 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 ANKRD45Q5TZF3 282 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms