RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 BBOX1O75936 387 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 BAG3O95817 575 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 SAFBQ15424 915 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHISA2-201ENST00000319420 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHISA2-201ENST00000319420 LY75O60449 1722 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
SHISA2-201ENST00000319420 ATP2B4P23634 1241 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 CBX8Q9HC52 389 aa18.42■□□□□ 0.54
SHISA2-201ENST00000319420 MYH15Q9Y2K3 1946 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 CCDC196A0A1B0GTZ2 297 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 ZNF165P49910 485 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 RBM43Q6ZSC3 357 aaKnown RBP18.41■□□□□ 0.54
SHISA2-201ENST00000319420 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
SHISA2-201ENST00000319420 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 NBPF11Q86T75 865 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 TTC12Q9H892 705 aaPredicted RBP18.41■□□□□ 0.54
SHISA2-201ENST00000319420 ARPP21Q9UBL0 812 aaPredicted RBP18.41■□□□□ 0.54
SHISA2-201ENST00000319420 ZNF831Q5JPB2 1677 aa18.41■□□□□ 0.54
SHISA2-201ENST00000319420 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
SHISA2-201ENST00000319420 KCNG4Q8TDN1 519 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 DBNDD1Q9H9R9 158 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 RXRBP28702 533 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 ADALQ6DHV7 355 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 C11orf57Q6ZUT1 292 aaPredicted RBP18.4■□□□□ 0.54
SHISA2-201ENST00000319420 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 FAM200AQ8TCP9 573 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 MROH7-TTC4A0A0A0MT08 1334 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 DEXIO95424 95 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 TROAPQ12815 778 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 NOSTRINQ8IVI9 506 aa18.4■□□□□ 0.54
SHISA2-201ENST00000319420 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
SHISA2-201ENST00000319420 COL24A1Q17RW2 1714 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 MMP1P03956 469 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 CHRNA5P30532 468 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 GRIN1Q05586 938 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
SHISA2-201ENST00000319420 PDE4CQ08493 712 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 ZNF772Q68DY9 489 aaPredicted RBP18.39■□□□□ 0.53
SHISA2-201ENST00000319420 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
SHISA2-201ENST00000319420 SHISA4Q96DD7 197 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 SRGNP10124 158 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
SHISA2-201ENST00000319420 PDILTQ8N807 584 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 ENGASEQ8NFI3 743 aa18.39■□□□□ 0.53
SHISA2-201ENST00000319420 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
SHISA2-201ENST00000319420 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 PFKFB1P16118 471 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 C12orf60Q5U649 245 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 ZNF444Q8N0Y2 327 aaPredicted RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 EARS2Q5JPH6 523 aaKnown RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
SHISA2-201ENST00000319420 WASF1Q92558 559 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 KAT14Q9H8E8 782 aa18.38■□□□□ 0.53
SHISA2-201ENST00000319420 ZNF202O95125 648 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 GSTO1P78417 241 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 FMR1NBQ8N0W7 255 aaPredicted RBP18.37■□□□□ 0.53
SHISA2-201ENST00000319420 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
SHISA2-201ENST00000319420 STAG2Q8N3U4 1231 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 YEATS4O95619 227 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
SHISA2-201ENST00000319420 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 GPKOWQ92917 476 aaPredicted RBP eCLIP18.37■□□□□ 0.53
SHISA2-201ENST00000319420 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
SHISA2-201ENST00000319420 A0A1B0GUL6 1792 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 LDHCP07864 332 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 CACNB3P54284 484 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 AXDND1Q5T1B0 1012 aaPredicted RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 CLEC10AQ8IUN9 316 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 CHD4Q14839 1912 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 HOXA10P31260 410 aaPredicted RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 TRIM5Q9C035 493 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 TTF2Q9UNY4 1162 aaKnown RBP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 OFD1O75665 1012 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 U2AF2P26368 475 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHISA2-201ENST00000319420 PKN1Q16512 942 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms