RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 GDF11O95390 407 aa21.34■■□□□ 1.01
EXOSC4-201ENST00000316052 PABPC4Q13310 644 aaKnown RBP eCLIP21.34■■□□□ 1.015e-7■■■■■ 30.2
EXOSC4-201ENST00000316052 PANK1Q8TE04 598 aa21.34■■□□□ 1.01
EXOSC4-201ENST00000316052 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
EXOSC4-201ENST00000316052 IGSF3O75054 1194 aa21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 CRACR2BQ8N4Y2 399 aaPredicted RBP21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 MIGA1Q8NAN2 632 aa21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 DEFB118Q96PH6 123 aa21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 P2RX7Q99572 595 aaKnown RBP21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 ANTXR1Q9H6X2 564 aa21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 PAK6Q9NQU5 681 aaPredicted RBP21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 EXOC6BQ9Y2D4 811 aa21.33■■□□□ 1.01
EXOSC4-201ENST00000316052 MYH1P12882 1939 aa21.33■■□□□ 1
EXOSC4-201ENST00000316052 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
EXOSC4-201ENST00000316052 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
EXOSC4-201ENST00000316052 ZBTB21Q9ULJ3 1066 aa21.32■■□□□ 1
EXOSC4-201ENST00000316052 TFRCP02786 760 aaKnown RBP21.31■■□□□ 1
EXOSC4-201ENST00000316052 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
EXOSC4-201ENST00000316052 TRIM34Q9BYJ4 488 aa21.31■■□□□ 1
EXOSC4-201ENST00000316052 TMOD4Q9NZQ9 345 aa21.31■■□□□ 1
EXOSC4-201ENST00000316052 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
EXOSC4-201ENST00000316052 PLXNB2O15031 1838 aa21.31■■□□□ 1
EXOSC4-201ENST00000316052 C19orf81C9J6K1 198 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 USP17L10C9JJH3 530 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 IRX3P78415 501 aaPredicted RBP21.3■■□□□ 1
EXOSC4-201ENST00000316052 CHRDL2Q6WN34 429 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 AACSQ86V21 672 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 HTATIP2Q9BUP3 242 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 CRISPLD2Q9H0B8 497 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 TXNRD2Q9NNW7 524 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 GINM1Q9NU53 330 aa21.3■■□□□ 1
EXOSC4-201ENST00000316052 HLA-DOAP06340 250 aa21.29■■□□□ 1
EXOSC4-201ENST00000316052 TRIM32Q13049 653 aa21.29■■□□□ 1
EXOSC4-201ENST00000316052 POTEEQ6S8J3 1075 aa21.29■■□□□ 1
EXOSC4-201ENST00000316052 EMILIN3Q9NT22 766 aa21.29■■□□□ 1
EXOSC4-201ENST00000316052 HERVK_113P62684 666 aa21.28■■□□□ 1
EXOSC4-201ENST00000316052 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
EXOSC4-201ENST00000316052 IL1RAPL2Q9NP60 686 aa21.28■■□□□ 1
EXOSC4-201ENST00000316052 RBM27Q9P2N5 1060 aaKnown RBP21.28■■□□□ 1
EXOSC4-201ENST00000316052 RBPJLQ9UBG7 517 aa21.28■■□□□ 1
EXOSC4-201ENST00000316052 GH2P01242 217 aa21.27■■□□□ 1
EXOSC4-201ENST00000316052 USP5P45974 858 aa21.27■■□□□ 1
EXOSC4-201ENST00000316052 Q3C1V9 767 aa21.27■■□□□ 1
EXOSC4-201ENST00000316052 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
EXOSC4-201ENST00000316052 ERC1Q8IUD2 1116 aa21.27■■□□□ 1
EXOSC4-201ENST00000316052 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.27■■□□□ 12e-7■■■■□ 23.4
EXOSC4-201ENST00000316052 LAMA3Q16787 3333 aa21.27■□□□□ 0.99
EXOSC4-201ENST00000316052 ZBED9Q6R2W3 1325 aa21.27■□□□□ 0.99
EXOSC4-201ENST00000316052 HMGCRP04035 888 aa21.26■□□□□ 0.99
EXOSC4-201ENST00000316052 MAP3K12Q12852 859 aa21.26■□□□□ 0.99
EXOSC4-201ENST00000316052 GPRC5AQ8NFJ5 357 aa21.26■□□□□ 0.99
EXOSC4-201ENST00000316052 CAPN2P17655 700 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 CYP2B6P20813 491 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 USP17L2Q6R6M4 530 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 RHPN1Q8TCX5 695 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 DIS3LQ8TF46 1054 aaKnown RBP21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 TRIB2Q92519 343 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 PAWRQ96IZ0 340 aaKnown RBP21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 RIOK1Q9BRS2 568 aaKnown RBP21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 PRO3102Q9H379 93 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 SERPINB13Q9UIV8 391 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 NR2E3Q9Y5X4 410 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 DNAH12Q6ZR08 3092 aa21.25■□□□□ 0.99
EXOSC4-201ENST00000316052 ALPK3Q96L96 1907 aa21.24■□□□□ 0.99
EXOSC4-201ENST00000316052 PLCD1P51178 756 aa21.24■□□□□ 0.99
EXOSC4-201ENST00000316052 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
EXOSC4-201ENST00000316052 EHD4Q9H223 541 aa21.24■□□□□ 0.99
EXOSC4-201ENST00000316052 RPTORQ8N122 1335 aa21.24■□□□□ 0.99
EXOSC4-201ENST00000316052 APBB1O00213 710 aa21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 ERVK-9P63128 1117 aa21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 ERVK-24P63145 666 aa21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 SIRT2Q8IXJ6 389 aa21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 PORCNQ9H237 461 aa21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 HMX1Q9NP08 348 aaPredicted RBP21.23■□□□□ 0.99
EXOSC4-201ENST00000316052 EVI5O60447 810 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 SHMT1P34896 483 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 MNX1P50219 401 aaPredicted RBP21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 EVX2Q03828 476 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 ZYXQ15942 572 aaKnown RBP21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 CERKLQ49MI3 558 aaPredicted RBP21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 HSP90AB4PQ58FF6 505 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 TMED8Q6PL24 325 aaPredicted RBP21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 TTC6Q86TZ1 520 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 ACER1Q8TDN7 264 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 USP6NLQ92738 828 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 NUDT12Q9BQG2 462 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 PAGR1Q9BTK6 254 aa21.22■□□□□ 0.99
EXOSC4-201ENST00000316052 MAGEB6P1A0A0J9YX57 407 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 XRCC5P13010 732 aaKnown RBP21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 PDE6AP16499 860 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 MAPK4P31152 587 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 NECAB2Q7Z6G3 386 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 C12orf42Q96LP6 360 aa21.21■□□□□ 0.99
EXOSC4-201ENST00000316052 CNMDO75829 334 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms