RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.11
LYSMD3-201ENST00000315948 ERICH2A1L162 156 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 RASA1P20936 1047 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 ALDH1B1P30837 517 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 ME1P48163 572 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 FUT2Q10981 343 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 R3HDM1Q15032 1099 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 PKN1Q16512 942 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 CRACR2BQ8N4Y2 399 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 ATP8A2Q9NTI2 1148 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 COL4A5P29400 1685 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 ZNF445P59923 1031 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 C15orf52Q6ZUT6 534 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 RASGRP4Q8TDF6 673 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 NASPP49321 788 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 RNF41Q9H4P4 317 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 PCDHA7Q9UN72 937 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 ATP6V1DQ9Y5K8 247 aa8.14□□□□□ -1.11
LYSMD3-201ENST00000315948 PDS5AQ29RF7 1337 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 CDK8P49336 464 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 LRSAM1Q6UWE0 723 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 COA1Q9GZY4 146 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 FGRP09769 529 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 TOB1P50616 345 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 SART3Q15020 963 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 ISM2Q6H9L7 571 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 IQCA1Q86XH1 822 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 TIAM2Q8IVF5 1701 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 DDTLA6NHG4 134 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 BAG3O95817 575 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 MBD3O95983 291 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 TSPY3P0CV98 308 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 TSPY8P0CW00 308 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 SF3A1Q15459 793 aaKnown RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 CEP95Q96GE4 821 aa8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 ARPP21Q9UBL0 812 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-201ENST00000315948 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CLRN2A0PK11 232 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 GOLGA6L4A6NEF3 574 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 AP5Z1O43299 807 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PPIP5K2O43314 1243 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CYTH3O43739 400 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 RAD21O60216 631 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 FMNL1O95466 1100 aaPredicted RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 AKR1B1P15121 316 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 JAG1P78504 1218 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 SYNE3Q6ZMZ3 975 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 DNAJC18Q9H819 358 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 VAT1LQ9HCJ6 419 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 FRMPD2Q68DX3 1309 aaPredicted RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 EGFRP00533 1210 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 IFNAR1P17181 557 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 BAG6P46379 1132 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 MRE11P49959 708 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PPP4CP60510 307 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 DACT2Q5SW24 774 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CCAR1Q8IX12 1150 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 UBA5Q9GZZ9 404 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CEP350Q5VT06 3117 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CRKP46108 304 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 NDUFA8P51970 172 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PLCB2Q00722 1185 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 ATP2B2Q01814 1243 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 SNW1Q13573 536 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 USP49Q70CQ1 688 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 LINC00301Q8NCQ3 95 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PRMT6Q96LA8 375 aaPredicted RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 UIMC1Q96RL1 719 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 EYA3Q99504 573 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 TMEM47Q9BQJ4 181 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PCDHB6Q9Y5E3 794 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 GAKO14976 1311 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 FAM205AQ6ZU69 1335 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 PDE4BQ07343 736 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CATIPQ7Z7H3 387 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-201ENST00000315948 CABP5Q9NP86 173 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms