RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MAGEB6Q8N7X4 407 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 A2ML1A8K2U0 1454 aa17.08■□□□□ 0.33
LEMD3-201ENST00000308330 SPAG5Q96R06 1193 aa17.08■□□□□ 0.33
LEMD3-201ENST00000308330 STX6O43752 255 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 HNRNPCP07910 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 TRMT1LQ7Z2T5 733 aaKnown RBP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 NAA15Q9BXJ9 866 aaKnown RBP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 GOLGA6BA6NDN3 693 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 LRMPQ12912 555 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 TTC14Q96N46 770 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 HOOK3Q86VS8 718 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
LEMD3-201ENST00000308330 RABGAP1Q9Y3P9 1069 aa17.08■□□□□ 0.32
LEMD3-201ENST00000308330 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 MAP3K9P80192 1104 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
LEMD3-201ENST00000308330 PDCD7Q8N8D1 485 aaKnown RBP17.07■□□□□ 0.32
LEMD3-201ENST00000308330 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 WTAPQ15007 396 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 SGSM3Q96HU1 749 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 DNAI2Q9GZS0 605 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 HMG20BQ9P0W2 317 aa17.07■□□□□ 0.32
LEMD3-201ENST00000308330 AFF2P51816 1311 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 CLTAP09496 248 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 MIER3Q7Z3K6 550 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 SUGP1Q8IWZ8 645 aaKnown RBP17.06■□□□□ 0.32
LEMD3-201ENST00000308330 BRF1Q92994 677 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 LUC7LQ9NQ29 371 aaKnown RBP17.06■□□□□ 0.32
LEMD3-201ENST00000308330 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
LEMD3-201ENST00000308330 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 PUM3Q15397 648 aaKnown RBP17.06■□□□□ 0.32
LEMD3-201ENST00000308330 LONRF2Q1L5Z9 754 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 ZFYVE27Q5T4F4 411 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
LEMD3-201ENST00000308330 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 HAUS1Q96CS2 278 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 ORC3Q9UBD5 711 aaPredicted RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 PAX7P23759 505 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 CEP131Q9UPN4 1083 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 TRIM42Q8IWZ5 723 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 DBNDD2Q9BQY9 259 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 KRT23Q9C075 422 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 MYOM2P54296 1465 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 NOP2P46087 812 aaKnown RBP17.05■□□□□ 0.32
LEMD3-201ENST00000308330 CORO7P57737 925 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 EHBP1Q8NDI1 1231 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
LEMD3-201ENST00000308330 NAA30Q147X3 362 aaPredicted RBP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 TRIM7Q9C029 511 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 SAMM50Q9Y512 469 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 RNF113AO15541 343 aaKnown RBP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.328e-7■■■■□ 20.9
LEMD3-201ENST00000308330 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 E7EVH7 732 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 ZSCAN22P10073 491 aaPredicted RBP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 COG7P83436 770 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 MUM1Q2TAK8 710 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 KLF18A0A0U1RQI7 1052 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 AP1G2O75843 785 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 FBXW10Q5XX13 1052 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 RINLQ6ZS11 566 aa17.04■□□□□ 0.32
LEMD3-201ENST00000308330 LARSQ9P2J5 1176 aaKnown RBP17.04■□□□□ 0.32
LEMD3-201ENST00000308330 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 TACC1O75410 805 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
LEMD3-201ENST00000308330 CCDC80Q76M96 950 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms