RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
SCAND1-201ENST00000305978 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
SCAND1-201ENST00000305978 SERPINB13Q9UIV8 391 aa18.86■□□□□ 0.61
SCAND1-201ENST00000305978 ZBTB21Q9ULJ3 1066 aa18.86■□□□□ 0.61
SCAND1-201ENST00000305978 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
SCAND1-201ENST00000305978 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
SCAND1-201ENST00000305978 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
SCAND1-201ENST00000305978 TATDN1Q6P1N9 297 aa18.85■□□□□ 0.61
SCAND1-201ENST00000305978 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
SCAND1-201ENST00000305978 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
SCAND1-201ENST00000305978 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
SCAND1-201ENST00000305978 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 ADD2P35612 726 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 LCORLQ8N3X6 602 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 SMCR8Q8TEV9 937 aaPredicted RBP18.84■□□□□ 0.61
SCAND1-201ENST00000305978 ZNF333Q96JL9 665 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCAND1-201ENST00000305978 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
SCAND1-201ENST00000305978 FMNL1O95466 1100 aaPredicted RBP18.83■□□□□ 0.6
SCAND1-201ENST00000305978 OSBPP22059 807 aa18.83■□□□□ 0.6
SCAND1-201ENST00000305978 BACE1P56817 501 aa18.83■□□□□ 0.6
SCAND1-201ENST00000305978 MTMR2Q13614 643 aa18.83■□□□□ 0.6
SCAND1-201ENST00000305978 SRRDQ9UH36 339 aa18.83■□□□□ 0.6
SCAND1-201ENST00000305978 HOXD10P28358 340 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 PLCD1P51178 756 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 FCGRTP55899 365 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 PABPC4Q13310 644 aaKnown RBP eCLIP18.82■□□□□ 0.67e-7■■■□□ 17.7
SCAND1-201ENST00000305978 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 NBPF11Q86T75 865 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 ARMT1Q9H993 441 aa18.82■□□□□ 0.6
SCAND1-201ENST00000305978 MYPNQ86TC9 1320 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 POTEFA5A3E0 1075 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 MBD4O95243 580 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 GH2P01242 217 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
SCAND1-201ENST00000305978 SHMT1P34896 483 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 UBE3CQ15386 1083 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 SH3TC2Q8TF17 1288 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 DCP1AQ9NPI6 582 aaPredicted RBP18.81■□□□□ 0.6
SCAND1-201ENST00000305978 MCM9Q9NXL9 1143 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 CEP290O15078 2479 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 PARP14Q460N5 1801 aa18.81■□□□□ 0.6
SCAND1-201ENST00000305978 C19orf81C9J6K1 198 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 USP17L10C9JJH3 530 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 CHGBP05060 677 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 EVX2Q03828 476 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 GPATCH3Q96I76 525 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
SCAND1-201ENST00000305978 TMOD4Q9NZQ9 345 aa18.8■□□□□ 0.6
SCAND1-201ENST00000305978 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
SCAND1-201ENST00000305978 PRKCZQ05513 592 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 GABPAQ06546 454 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 ABCB5Q2M3G0 1257 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 CERKLQ49MI3 558 aaPredicted RBP18.79■□□□□ 0.6
SCAND1-201ENST00000305978 ZSCAN25Q6NSZ9 544 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 ANKRD13CQ8N6S4 541 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
SCAND1-201ENST00000305978 RLFQ13129 1914 aa18.78■□□□□ 0.6
SCAND1-201ENST00000305978 GREB1LQ9C091 1923 aaPredicted RBP18.78■□□□□ 0.6
SCAND1-201ENST00000305978 PRKAB2O43741 272 aa18.78■□□□□ 0.6
SCAND1-201ENST00000305978 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
SCAND1-201ENST00000305978 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
SCAND1-201ENST00000305978 RAET1EQ8TD07 263 aa18.78■□□□□ 0.6
SCAND1-201ENST00000305978 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
SCAND1-201ENST00000305978 CYP2D6P10635 497 aa18.77■□□□□ 0.6
SCAND1-201ENST00000305978 IRX3P78415 501 aaPredicted RBP18.77■□□□□ 0.6
SCAND1-201ENST00000305978 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
SCAND1-201ENST00000305978 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
SCAND1-201ENST00000305978 GABRQQ9UN88 632 aa18.77■□□□□ 0.6
SCAND1-201ENST00000305978 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 TNPO2O14787 897 aaKnown RBP18.76■□□□□ 0.59
SCAND1-201ENST00000305978 GRK4P32298 578 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 RAB3GAP1Q15042 981 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 KBTBD3Q8NAB2 608 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 PUS7LQ9H0K6 701 aaKnown RBP18.76■□□□□ 0.59
SCAND1-201ENST00000305978 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
SCAND1-201ENST00000305978 TTC41PQ6P2S7 1318 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 A0A0G2JMZ2 1700 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 MYCP01106 439 aaPredicted RBP18.75■□□□□ 0.59
SCAND1-201ENST00000305978 EN2P19622 333 aaPredicted RBP18.75■□□□□ 0.59
SCAND1-201ENST00000305978 GUCY1A2P33402 732 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 C12orf42Q96LP6 360 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
SCAND1-201ENST00000305978 FEZ1Q99689 392 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 KIAA1683Q9H0B3 1180 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 MORF4L1Q9UBU8 362 aa18.75■□□□□ 0.59
SCAND1-201ENST00000305978 FLT3LGP49771 235 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 USP14P54578 494 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 HERVK_113P62684 666 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 C12orf60Q5U649 245 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 SLC44A5Q8NCS7 719 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 ACER1Q8TDN7 264 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
SCAND1-201ENST00000305978 DYNLL2Q96FJ2 89 aa18.74■□□□□ 0.59
SCAND1-201ENST00000305978 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms