RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OXER1Q8TDS5 423 aa15.02■□□□□ -0
CASC4-201ENST00000299957 LPIN2Q92539 896 aa15.02■□□□□ -0
CASC4-201ENST00000299957 FAM207AQ9NSI2 230 aaPredicted RBP15.02■□□□□ -0
CASC4-201ENST00000299957 ZNF652Q9Y2D9 606 aa15.02■□□□□ -0
CASC4-201ENST00000299957 GOLGA6L10A6NI86 522 aa15.02■□□□□ -0
CASC4-201ENST00000299957 GUCY1A2P33402 732 aa15.02■□□□□ -0
CASC4-201ENST00000299957 CTSWP56202 376 aa15.02■□□□□ -0
CASC4-201ENST00000299957 TTC19Q6DKK2 380 aaPredicted RBP15.02■□□□□ -0
CASC4-201ENST00000299957 RGS22Q8NE09 1264 aa15.02■□□□□ -0
CASC4-201ENST00000299957 TAF4BQ92750 862 aa15.02■□□□□ -0
CASC4-201ENST00000299957 SYMPKQ92797 1274 aaKnown RBP15.02■□□□□ -0
CASC4-201ENST00000299957 ZNF609O15014 1411 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 PDE8AO60658 829 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 LCORLQ8N3X6 602 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 CTAGE1Q96RT6 745 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.02□□□□□ -0.01
CASC4-201ENST00000299957 GOPCQ9HD26 462 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
CASC4-201ENST00000299957 PDE8BO95263 885 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 ZNF76P36508 570 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 TXKP42681 527 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 USP8P40818 1118 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 KIF5AQ12840 1032 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 TOGARAM2Q6ZUX3 1019 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 PDE11AQ9HCR9 933 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 FAM205CA6NFA0 338 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 RBM6P78332 1123 aaKnown RBP15.01□□□□□ -0.01
CASC4-201ENST00000299957 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 CALML4Q96GE6 196 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 CPVLQ9H3G5 476 aa15.01□□□□□ -0.01
CASC4-201ENST00000299957 A0A1W2PQ27 194 aa15□□□□□ -0.01
CASC4-201ENST00000299957 A0A1W2PQ64 194 aa15□□□□□ -0.01
CASC4-201ENST00000299957 A0A1W2PQD8 194 aa15□□□□□ -0.01
CASC4-201ENST00000299957 PRR29P0C7W0 189 aa15□□□□□ -0.01
CASC4-201ENST00000299957 GABPB1Q06547 395 aaPredicted RBP15□□□□□ -0.01
CASC4-201ENST00000299957 SLC35F6Q8N357 371 aa15□□□□□ -0.01
CASC4-201ENST00000299957 GPATCH11Q8N954 259 aa15□□□□□ -0.01
CASC4-201ENST00000299957 NELFBQ8WX92 580 aa15□□□□□ -0.01
CASC4-201ENST00000299957 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
CASC4-201ENST00000299957 PPARAQ07869 468 aa15□□□□□ -0.01
CASC4-201ENST00000299957 PDE4DQ08499 809 aa15□□□□□ -0.01
CASC4-201ENST00000299957 RBL2Q08999 1139 aa15□□□□□ -0.01
CASC4-201ENST00000299957 MAP9Q49MG5 647 aa15□□□□□ -0.01
CASC4-201ENST00000299957 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
CASC4-201ENST00000299957 CNGA4Q8IV77 575 aa15□□□□□ -0.01
CASC4-201ENST00000299957 CEP112Q8N8E3 955 aa15□□□□□ -0.01
CASC4-201ENST00000299957 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
CASC4-201ENST00000299957 FDPSP14324 419 aaKnown RBP15□□□□□ -0.01
CASC4-201ENST00000299957 ZSCAN20P17040 1043 aaPredicted RBP15□□□□□ -0.01
CASC4-201ENST00000299957 FAM182BQ5T319 152 aa15□□□□□ -0.01
CASC4-201ENST00000299957 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
CASC4-201ENST00000299957 NAPGQ99747 312 aaPredicted RBP15□□□□□ -0.01
CASC4-201ENST00000299957 NLRC4Q9NPP4 1024 aa15□□□□□ -0.01
CASC4-201ENST00000299957 MAN1B1Q9UKM7 699 aa15□□□□□ -0.01
CASC4-201ENST00000299957 TEX33O43247 280 aa15□□□□□ -0.01
CASC4-201ENST00000299957 ZBTB38Q8NAP3 1195 aaPredicted RBP15□□□□□ -0.01
CASC4-201ENST00000299957 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 SMIM23A6NLE4 172 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 GRIN1Q05586 938 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 PAK1Q13153 545 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 ATG9AQ7Z3C6 839 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 FUCA2Q9BTY2 467 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
CASC4-201ENST00000299957 INF2Q27J81 1249 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
CASC4-201ENST00000299957 MROH2AA6NES4 1674 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 TFAP4Q01664 338 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 DDB1Q16531 1140 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 SHC4Q6S5L8 630 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 MICALL1Q8N3F8 863 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 CRACR2BQ8N4Y2 399 aaPredicted RBP14.99□□□□□ -0.01
CASC4-201ENST00000299957 ATRIPQ8WXE1 791 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 WDR24Q96S15 920 aa14.99□□□□□ -0.01
CASC4-201ENST00000299957 NOC4LQ9BVI4 516 aaKnown RBP14.99□□□□□ -0.01
CASC4-201ENST00000299957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.013e-10■■■■■ 130.4
CASC4-201ENST00000299957 H7C1W4 665 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 PNMA6AP0CW24 399 aaPredicted RBP14.98□□□□□ -0.01
CASC4-201ENST00000299957 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 PDIA6Q15084 440 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 ZSCAN26Q16670 478 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 MAPKAPK5Q8IW41 473 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 PARD6BQ9BYG5 372 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 DDX41Q9UJV9 622 aaKnown RBP14.98□□□□□ -0.01
CASC4-201ENST00000299957 NEDD4P46934 1319 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 KRT86O43790 486 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 ADD2P35612 726 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 CCZ1BP86790 482 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 CCZ1P86791 482 aaPredicted RBP14.98□□□□□ -0.01
CASC4-201ENST00000299957 LRRN4CLQ8ND94 238 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 GPCPD1Q9NPB8 672 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
CASC4-201ENST00000299957 CYP27A1Q02318 531 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 SPAG1Q07617 926 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
CASC4-201ENST00000299957 NMT2O60551 498 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 321.1 ms