RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 CXCL11O14625 94 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 GNRH1P01148 92 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 CCL5P13501 91 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 PTPRAP18433 802 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 PRKCZQ05513 592 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 TFCP2Q12800 502 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 PICALMQ13492 652 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 IDI2Q9BXS1 227 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 COPRSQ9NQ92 184 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
CNOT9-202ENST00000295701 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 GAKO14976 1311 aa11.53□□□□□ -0.56
CNOT9-202ENST00000295701 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
CNOT9-202ENST00000295701 SEMA3EO15041 775 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 ENTPD3O75355 529 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 HOXD10P28358 340 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 BTDP43251 543 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
CNOT9-202ENST00000295701 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 DPF3Q92784 378 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 XAGE2Q96GT9 111 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
CNOT9-202ENST00000295701 DOCK1Q14185 1865 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
CNOT9-202ENST00000295701 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 ELNP15502 786 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 DZIP1Q86YF9 867 aaKnown RBP11.51□□□□□ -0.57
CNOT9-202ENST00000295701 API5Q9BZZ5 524 aaKnown RBP11.51□□□□□ -0.57
CNOT9-202ENST00000295701 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
CNOT9-202ENST00000295701 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
CNOT9-202ENST00000295701 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
CNOT9-202ENST00000295701 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
CNOT9-202ENST00000295701 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 SRGAP3O43295 1099 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 GJB1P08034 283 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 GJA8P48165 433 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
CNOT9-202ENST00000295701 PTPN5P54829 565 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 FCGRTP55899 365 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 RHBDL3P58872 404 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 MECOMQ03112 1051 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 NBR1Q14596 966 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
CNOT9-202ENST00000295701 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 FASTKD5Q7L8L6 764 aaKnown RBP11.5□□□□□ -0.57
CNOT9-202ENST00000295701 UBE2Q1Q7Z7E8 422 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 WNT2BQ93097 391 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 ATAD5Q96QE3 1844 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
CNOT9-202ENST00000295701 GPR75-ASB3A0A0A6YYF3 556 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 ADCY3O60266 1144 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 CTNND1O60716 968 aaKnown RBP11.49□□□□□ -0.57
CNOT9-202ENST00000295701 FLT3LGP49771 235 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 UBXN2AP68543 259 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 ZGPATQ8N5A5 531 aaKnown RBP11.49□□□□□ -0.57
CNOT9-202ENST00000295701 HMG20BQ9P0W2 317 aa11.49□□□□□ -0.57
CNOT9-202ENST00000295701 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
CNOT9-202ENST00000295701 ALPK3Q96L96 1907 aa11.48□□□□□ -0.57
CNOT9-202ENST00000295701 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
CNOT9-202ENST00000295701 THSD4Q6ZMP0 1018 aa11.48□□□□□ -0.57
CNOT9-202ENST00000295701 ANKRD13CQ8N6S4 541 aa11.48□□□□□ -0.57
CNOT9-202ENST00000295701 U2AF1L4Q8WU68 220 aaKnown RBP11.48□□□□□ -0.57
CNOT9-202ENST00000295701 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.48□□□□□ -0.57
CNOT9-202ENST00000295701 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 PEX10O60683 326 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 SGPL1O95470 568 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 INHAP05111 366 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 SPP2Q13103 211 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 MVPQ14764 893 aaKnown RBP11.47□□□□□ -0.57
CNOT9-202ENST00000295701 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 NSUN4Q96CB9 384 aaKnown RBP11.47□□□□□ -0.57
CNOT9-202ENST00000295701 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 SLC45A1Q9Y2W3 748 aa11.47□□□□□ -0.57
CNOT9-202ENST00000295701 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 SIPA1L1O43166 1804 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 MAP3K7O43318 606 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 BCAR3O75815 825 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 FARP2O94887 1054 aaPredicted RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 TFRCP02786 760 aaKnown RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 GNAI3P08754 354 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 MCAMP43121 646 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 JAG1P78504 1218 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms