RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 C1orf53Q5VUE5 145 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 SH3RF1Q7Z6J0 888 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 P2RX7Q99572 595 aaKnown RBP19.45■□□□□ 0.7
UBXN1-201ENST00000294119 ZNF576Q9H609 170 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 FLRT1Q9NZU1 646 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 UTYO14607 1347 aa19.45■□□□□ 0.7
UBXN1-201ENST00000294119 ZBTB22O15209 634 aa19.44■□□□□ 0.7
UBXN1-201ENST00000294119 HERVK_113P62684 666 aa19.44■□□□□ 0.7
UBXN1-201ENST00000294119 PUM3Q15397 648 aaKnown RBP19.44■□□□□ 0.7
UBXN1-201ENST00000294119 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
UBXN1-201ENST00000294119 IFIT1P09914 478 aaKnown RBP19.43■□□□□ 0.7
UBXN1-201ENST00000294119 ITGB8P26012 769 aa19.43■□□□□ 0.7
UBXN1-201ENST00000294119 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
UBXN1-201ENST00000294119 ERVK-24P63145 666 aa19.43■□□□□ 0.7
UBXN1-201ENST00000294119 RRP1BQ14684 758 aaKnown RBP19.43■□□□□ 0.7
UBXN1-201ENST00000294119 ZSCAN29Q8IWY8 852 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-201ENST00000294119 RNPC3Q96LT9 517 aaKnown RBP19.43■□□□□ 0.7
UBXN1-201ENST00000294119 MUC6Q6W4X9 2439 aa19.43■□□□□ 0.7
UBXN1-201ENST00000294119 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
UBXN1-201ENST00000294119 MAP2K5Q13163 448 aa19.42■□□□□ 0.7
UBXN1-201ENST00000294119 TRIM60Q495X7 471 aa19.42■□□□□ 0.7
UBXN1-201ENST00000294119 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
UBXN1-201ENST00000294119 TRPV1Q8NER1 839 aa19.42■□□□□ 0.7
UBXN1-201ENST00000294119 LRFN3Q9BTN0 628 aa19.42■□□□□ 0.7
UBXN1-201ENST00000294119 PRDM5Q9NQX1 630 aaPredicted RBP19.42■□□□□ 0.7
UBXN1-201ENST00000294119 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
UBXN1-201ENST00000294119 HOXC6P09630 235 aa19.41■□□□□ 0.7
UBXN1-201ENST00000294119 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-201ENST00000294119 FAM163AQ96GL9 167 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-201ENST00000294119 WDR18Q9BV38 432 aa19.41■□□□□ 0.7
UBXN1-201ENST00000294119 C9orf78Q9NZ63 289 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-201ENST00000294119 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-201ENST00000294119 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-201ENST00000294119 FAM196BA6NMK8 535 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 CAP2P40123 477 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
UBXN1-201ENST00000294119 MFSD14CQ5VZR4 134 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 HCN4Q9Y3Q4 1203 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 MYO9BQ13459 2157 aa19.4■□□□□ 0.7
UBXN1-201ENST00000294119 VAMP4O75379 141 aa19.39■□□□□ 0.69
UBXN1-201ENST00000294119 NBPF7P0C2Y1 421 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-201ENST00000294119 BMP1P13497 986 aa19.39■□□□□ 0.69
UBXN1-201ENST00000294119 BACE1P56817 501 aa19.39■□□□□ 0.69
UBXN1-201ENST00000294119 GJC2Q5T442 439 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-201ENST00000294119 TIFAQ96CG3 184 aa19.39■□□□□ 0.69
UBXN1-201ENST00000294119 EDC3Q96F86 508 aaKnown RBP19.39■□□□□ 0.69
UBXN1-201ENST00000294119 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
UBXN1-201ENST00000294119 TRANK1O15050 2925 aa19.38■□□□□ 0.69
UBXN1-201ENST00000294119 CYBAP13498 195 aa19.38■□□□□ 0.69
UBXN1-201ENST00000294119 ADGRE1Q14246 886 aa19.38■□□□□ 0.69
UBXN1-201ENST00000294119 GTF3C2Q8WUA4 911 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-201ENST00000294119 LPIN2Q92539 896 aa19.38■□□□□ 0.69
UBXN1-201ENST00000294119 SNX27Q96L92 541 aa19.38■□□□□ 0.69
UBXN1-201ENST00000294119 NECAB3Q96P71 396 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-201ENST00000294119 GAS2L1Q99501 681 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-201ENST00000294119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBXN1-201ENST00000294119 TCF20Q9UGU0 1960 aaKnown RBP19.38■□□□□ 0.69
UBXN1-201ENST00000294119 KIAA0355O15063 1070 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 RHBDL3P58872 404 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 MTMR2Q13614 643 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 ARRDC4Q8NCT1 418 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 AS3MTQ9HBK9 375 aa19.37■□□□□ 0.69
UBXN1-201ENST00000294119 SLC5A1P13866 664 aa19.36■□□□□ 0.69
UBXN1-201ENST00000294119 PICALMQ13492 652 aa19.36■□□□□ 0.69
UBXN1-201ENST00000294119 CXXC1Q9P0U4 656 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-201ENST00000294119 SIPA1L1O43166 1804 aa19.35■□□□□ 0.69
UBXN1-201ENST00000294119 CNMDO75829 334 aa19.35■□□□□ 0.69
UBXN1-201ENST00000294119 TLE2Q04725 743 aa19.35■□□□□ 0.69
UBXN1-201ENST00000294119 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
UBXN1-201ENST00000294119 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
UBXN1-201ENST00000294119 SLC15A5A6NIM6 579 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 KBTBD13C9JR72 458 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 SEMA3EO15041 775 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 PTPREP23469 700 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 CYP2C19P33261 490 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 BTDP43251 543 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 GRB14Q14449 540 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 NPLOC4Q8TAT6 608 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 SRCIN1Q9C0H9 1055 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 PRDM12Q9H4Q4 367 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 EPHX3Q9H6B9 360 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 PLXNA1Q9UIW2 1896 aa19.34■□□□□ 0.69
UBXN1-201ENST00000294119 ZNF236Q9UL36 1845 aa19.33■□□□□ 0.69
UBXN1-201ENST00000294119 GPR75-ASB3A0A0A6YYF3 556 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 C19orf81C9J6K1 198 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 CNGA1P29973 690 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 JAG1P78504 1218 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 ALDH1L2Q3SY69 923 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 RASIP1Q5U651 963 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 PBX4Q9BYU1 374 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 C11orf16Q9NQ32 467 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 DENND2AQ9ULE3 1009 aa19.33■□□□□ 0.68
UBXN1-201ENST00000294119 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
UBXN1-201ENST00000294119 CLTBP09497 229 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms