RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MMP14P50281 582 aa13.46□□□□□ -0.26
SYNGAP1-201ENST00000293748 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.26
SYNGAP1-201ENST00000293748 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.26
SYNGAP1-201ENST00000293748 TMX1Q9H3N1 280 aa13.46□□□□□ -0.26
SYNGAP1-201ENST00000293748 OGFRQ9NZT2 677 aa13.46□□□□□ -0.26
SYNGAP1-201ENST00000293748 NUP98P52948 1817 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 SEMA3EO15041 775 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 GSTO1P78417 241 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 ZBTB40Q9NUA8 1239 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 JADE2Q9NQC1 790 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 N4BP3O15049 544 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 GTF2IP78347 998 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 KLHDC4Q8TBB5 520 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■■■□ 24.9
SYNGAP1-201ENST00000293748 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
SYNGAP1-201ENST00000293748 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 MCM6Q14566 821 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 MRPS27Q92552 414 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 F13A1P00488 732 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 ZNF76P36508 570 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 SYKP43405 635 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 DNA2P51530 1060 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 AMPD3Q01432 767 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 TFCP2Q12800 502 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 GPC2Q8N158 579 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 NFKBIEO00221 500 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 CYLC1P35663 651 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 GOLGA1Q92805 767 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 OPA1O60313 960 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 TERF1P54274 439 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 GPR108Q9NPR9 543 aa13.44□□□□□ -0.26
SYNGAP1-201ENST00000293748 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 GLTPD2A6NH11 291 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 CAPN2P17655 700 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 A0A1B0GUL7 405 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 AKR1B10O60218 316 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 TYRO3Q06418 890 aa13.43□□□□□ -0.26
SYNGAP1-201ENST00000293748 TMCO5BA8MYB1 307 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 BMP15O95972 392 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 DCPSQ96C86 337 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 TNNI2P48788 182 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 PDE1AP54750 535 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 DLGAP5Q15398 846 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 TCP11L1Q9NUJ3 509 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 EBAG9O00559 213 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 LIG1P18858 919 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 RMND1Q9NWS8 449 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 STRIP1Q5VSL9 837 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
SYNGAP1-201ENST00000293748 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 LDHBP07195 334 aaKnown RBP13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 UBA7P41226 1012 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 USP5P45974 858 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 NLRP5P59047 1200 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 MFSD14BQ5SR56 506 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 V9GYY5 206 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 STAMBPO95630 424 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 USP17L8P0C7I0 530 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 SYT1P21579 422 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 AGBL3Q8NEM8 1001 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 GYG1P46976 350 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 CETN1Q12798 172 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 CATIPQ7Z7H3 387 aa13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.41□□□□□ -0.26
SYNGAP1-201ENST00000293748 F8W031 263 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms