RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
SEC16A-202ENST00000290037 ERICH4A6NGS2 130 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 HOMER3Q9NSC5 361 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 MBD5Q9P267 1494 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 FAM177BA6PVY3 158 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 ERCC5P28715 1186 aaPredicted RBP16.46■□□□□ 0.22
SEC16A-202ENST00000290037 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 CCDC117Q8IWD4 279 aaPredicted RBP16.46■□□□□ 0.22
SEC16A-202ENST00000290037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.22
SEC16A-202ENST00000290037 ZNF830Q96NB3 372 aaPredicted RBP16.46■□□□□ 0.22
SEC16A-202ENST00000290037 STAP2Q9UGK3 403 aa16.46■□□□□ 0.22
SEC16A-202ENST00000290037 SLC26A4O43511 780 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 STMN2Q93045 179 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
SEC16A-202ENST00000290037 ALCAMQ13740 583 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 C8orf74Q6P047 294 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 LUC7L3O95232 432 aaKnown RBP16.45■□□□□ 0.22
SEC16A-202ENST00000290037 IL13P35225 146 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 FOXO3O43524 673 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 HSPA8P11142 646 aaKnown RBP16.45■□□□□ 0.22
SEC16A-202ENST00000290037 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 DDB1Q16531 1140 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 PHBP35232 272 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 SEPT6Q14141 434 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 HOXC9P31274 260 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 ZNF75DP51815 510 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 ZBTB16Q05516 673 aa16.45■□□□□ 0.22
SEC16A-202ENST00000290037 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 BCCIPQ9P287 314 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 DNM2P50570 870 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 TNFAIP1Q13829 316 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 H7C1D1 291 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 SARNPP82979 210 aaKnown RBP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 PPP1R7Q15435 360 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 ZKSCAN3Q9BRR0 538 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 NCAPGQ9BPX3 1015 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 PRPF6O94906 941 aaKnown RBP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 GSTA5Q7RTV2 222 aa16.44■□□□□ 0.22
SEC16A-202ENST00000290037 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
SEC16A-202ENST00000290037 SECISBP2LQ93073 1101 aaKnown RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 TCP1P17987 556 aaKnown RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 GOLGA8KD6RF30 607 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 SLMAPQ14BN4 828 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 SKIDA1Q1XH10 827 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 GOLGA8CPA6NN73 597 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
SEC16A-202ENST00000290037 AOC3Q16853 763 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 DNAJC25Q9H1X3 360 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 ODF2LQ9ULJ1 636 aa16.43■□□□□ 0.22
SEC16A-202ENST00000290037 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 BPIFB4P59827 614 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 POSTNQ15063 836 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 GCFC2P16383 781 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 HAUS4Q9H6D7 363 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 PTCH1Q13635 1447 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SLC27A2O14975 620 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 PFDN6O15212 129 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SLC8A1P32418 973 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 TUBB6Q9BUF5 446 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 NOC4LQ9BVI4 516 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 SLC52A2Q9HAB3 445 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 COMMD10Q9Y6G5 202 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 KCNA6P17658 529 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
SEC16A-202ENST00000290037 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 TRIM42Q8IWZ5 723 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
SEC16A-202ENST00000290037 IKBKBO14920 756 aa16.41■□□□□ 0.22
SEC16A-202ENST00000290037 DDX23Q9BUQ8 820 aaKnown RBP16.41■□□□□ 0.22
SEC16A-202ENST00000290037 I3L4J1 428 aa16.41■□□□□ 0.22
SEC16A-202ENST00000290037 BRD1O95696 1058 aa16.41■□□□□ 0.22
SEC16A-202ENST00000290037 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
SEC16A-202ENST00000290037 CBX1P83916 185 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms