RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TPM1P09493 284 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 OXER1Q8TDS5 423 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 LPIN2Q92539 896 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 TDO2P48775 406 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 KARSQ15046 597 aaKnown RBP15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 MRFAP1Q9Y605 127 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 ITGB4P16144 1822 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 PDE8AO60658 829 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 DEXIO95424 95 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 FGFR2P21802 821 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 PLCD1P51178 756 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 FAM193AP78312 1265 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 MTF1Q14872 753 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 LCORLQ8N3X6 602 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 CRACR2BQ8N4Y2 399 aaPredicted RBP15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 TRIML1Q8N9V2 468 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 NR1I3Q14994 352 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 NUP133Q8WUM0 1156 aa15.12■□□□□ 0.01
SLC28A1-201ENST00000286749 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 POLR3GO15318 223 aaPredicted RBP15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 CREBRFQ8IUR6 639 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 CABP5Q9NP86 173 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 SLC4A4Q9Y6R1 1079 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 GPR161Q8N6U8 529 aaKnown RBP15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 STAG1Q8WVM7 1258 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 DHX58Q96C10 678 aa15.11■□□□□ 0.01
SLC28A1-201ENST00000286749 LRP5O75197 1615 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 ERICH2A1L162 156 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 SOWAHDA6NJG2 315 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 SASH3O75995 380 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 SLC5A1P13866 664 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 CYP2C19P33261 490 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 KANK3Q6NY19 840 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 BRINP3Q76B58 766 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 RSRC2Q7L4I2 434 aaKnown RBP15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 CEP131Q9UPN4 1083 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 AKR1B15C9JRZ8 316 aaPredicted RBP15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 TEX33O43247 280 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 EVA1CP58658 441 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 KLHL10Q6JEL2 608 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 SPATA20Q8TB22 786 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 IRX2Q9BZI1 471 aaPredicted RBP15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 NACAP1Q9BZK3 213 aa15.1■□□□□ 0.01
SLC28A1-201ENST00000286749 MYH8P13535 1937 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 A0A087X0B3 334 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 ERCC5P28715 1186 aaPredicted RBP15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 AFMP43652 599 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 STX17P56962 302 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 ZBTB1Q9Y2K1 713 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 CCDC175P0C221 793 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 CASP1P29466 404 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 SHISA4Q96DD7 197 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 LZTFL1Q9NQ48 299 aa15.09■□□□□ 0.01
SLC28A1-201ENST00000286749 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0.01
SLC28A1-201ENST00000286749 ABCA3Q99758 1704 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
SLC28A1-201ENST00000286749 APTXQ7Z2E3 356 aaKnown RBP15.08■□□□□ 0
SLC28A1-201ENST00000286749 CPLX3Q8WVH0 158 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 EPSTI1Q96J88 318 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 ATP8B1O43520 1251 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 CYP19A1P11511 503 aaPredicted RBP15.08■□□□□ 0
SLC28A1-201ENST00000286749 RBL2Q08999 1139 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 RAD9BQ6WBX8 426 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 RABGGTAQ92696 567 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 GOLGA1Q92805 767 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 PANX2Q96RD6 677 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.08■□□□□ 0
SLC28A1-201ENST00000286749 VPS54Q9P1Q0 977 aa15.08■□□□□ 0
SLC28A1-201ENST00000286749 A0A0U1RQJ8 604 aa15.07■□□□□ 0
SLC28A1-201ENST00000286749 TRIM75PA6NK02 468 aa15.07■□□□□ 0
SLC28A1-201ENST00000286749 GNAT2P19087 354 aa15.07■□□□□ 0
SLC28A1-201ENST00000286749 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
SLC28A1-201ENST00000286749 SPATA1Q5VX52 437 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms