RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 CYP27A1Q02318 531 aa17.64■□□□□ 0.41
USP43-201ENST00000285199 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
USP43-201ENST00000285199 NAA25Q14CX7 972 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 SDR42E1Q8WUS8 393 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 PAIP2Q9BPZ3 127 aaKnown RBP17.63■□□□□ 0.41
USP43-201ENST00000285199 ZNF76P36508 570 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
USP43-201ENST00000285199 SNAP23O00161 211 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 BUB1O43683 1085 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 KIF5BP33176 963 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 CCDC25Q86WR0 208 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 EPSTI1Q96J88 318 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 TBC1D7Q9P0N9 293 aa17.63■□□□□ 0.41
USP43-201ENST00000285199 MAGEA1P43355 309 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 CASP8Q14790 479 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
USP43-201ENST00000285199 TMEM87BQ96K49 555 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 EPN1Q9Y6I3 576 aaPredicted RBP17.62■□□□□ 0.41
USP43-201ENST00000285199 AMPD3Q01432 767 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 RAPGEF1Q13905 1077 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 SECISBP2LQ93073 1101 aaKnown RBP17.62■□□□□ 0.41
USP43-201ENST00000285199 COPRSQ9NQ92 184 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 MAN1B1Q9UKM7 699 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 CCDC151A5D8V7 595 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 TEX33O43247 280 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 NAPAP54920 295 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 APOA5Q6Q788 366 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 OR8K1Q8NGG5 319 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
USP43-201ENST00000285199 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
USP43-201ENST00000285199 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 TMEM266Q2M3C6 531 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 PHLPP2Q6ZVD8 1323 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
USP43-201ENST00000285199 PNMA8AQ86V59 439 aaPredicted RBP17.61■□□□□ 0.41
USP43-201ENST00000285199 CCDC24Q8N4L8 307 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 KDRP35968 1356 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 KCNJ18B7U540 433 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 SLC7A5Q01650 507 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 KCNJ12Q14500 433 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 PDE4BQ07343 736 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 SYMPKQ92797 1274 aaKnown RBP17.61■□□□□ 0.41
USP43-201ENST00000285199 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
USP43-201ENST00000285199 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
USP43-201ENST00000285199 TMEM110-MUSTN1A8MSY1 372 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
USP43-201ENST00000285199 E7EVH7 732 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 TRAF5O00463 557 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 KRT13P13646 458 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 BABAM1Q9NWV8 329 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
USP43-201ENST00000285199 BMP15O95972 392 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 C19orf44Q9H6X5 657 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
USP43-201ENST00000285199 RRAGAQ7L523 313 aa17.6■□□□□ 0.41
USP43-201ENST00000285199 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 IKBKBO14920 756 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 CCDC91Q7Z6B0 441 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 CDC42BPAQ5VT25 1732 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 TUBBP07437 444 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 MORC3Q14149 939 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 UHMK1Q8TAS1 419 aaKnown RBP17.59■□□□□ 0.41
USP43-201ENST00000285199 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
USP43-201ENST00000285199 MED14O60244 1454 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 PTGDRQ13258 359 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 SPATA1Q5VX52 437 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 ZNF654Q8IZM8 581 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
USP43-201ENST00000285199 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
USP43-201ENST00000285199 TSPY3P0CV98 308 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 TSPY8P0CW00 308 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 TXKP42681 527 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 TNNI2P48788 182 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 KIAA0753Q2KHM9 967 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 RIN2Q8WYP3 895 aaPredicted RBP17.58■□□□□ 0.41
USP43-201ENST00000285199 ACSBG1Q96GR2 724 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 KIF28PB7ZC32 967 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 MAP2K2P36507 400 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 OSBPL5Q9H0X9 879 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms