RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 KCNH3Q9ULD8 1083 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 MYL5Q02045 173 aa28.82■■■□□ 2.2
ROM1-201ENST00000278833 METTL16Q86W50 562 aaKnown RBP28.82■■■□□ 2.2
ROM1-201ENST00000278833 RIOK1Q9BRS2 568 aaKnown RBP28.82■■■□□ 2.2
ROM1-201ENST00000278833 IFNKQ9P0W0 207 aa28.82■■■□□ 2.2
ROM1-201ENST00000278833 HOOK1Q9UJC3 728 aaKnown RBP28.82■■■□□ 2.2
ROM1-201ENST00000278833 SEMA3EO15041 775 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 CYP7A1P22680 504 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 TOB1P50616 345 aaPredicted RBP28.81■■■□□ 2.2
ROM1-201ENST00000278833 STK11IPQ8N1F8 1099 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 FANCBQ8NB91 859 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 ESR2Q92731 530 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 BSDC1Q9NW68 430 aaPredicted RBP28.81■■■□□ 2.2
ROM1-201ENST00000278833 FBXO2Q9UK22 296 aaPredicted RBP28.81■■■□□ 2.2
ROM1-201ENST00000278833 MYH13Q9UKX3 1938 aa28.81■■■□□ 2.2
ROM1-201ENST00000278833 MAGEB6P1A0A0J9YX57 407 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 CBFA2T2O43439 604 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 NT5DC1Q5TFE4 455 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 CEP135Q66GS9 1140 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 PSDA5PKW4 1024 aaPredicted RBP28.8■■■□□ 2.2
ROM1-201ENST00000278833 TUBB4AP04350 444 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 ANKRD18AQ8IVF6 992 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 CEP131Q9UPN4 1083 aa28.8■■■□□ 2.2
ROM1-201ENST00000278833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.79■■■□□ 2.2
ROM1-201ENST00000278833 BIN1O00499 593 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 GUCY1A2P33402 732 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 FANCCQ00597 558 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 MDM2Q00987 491 aaPredicted RBP28.79■■■□□ 2.2
ROM1-201ENST00000278833 R3HDM1Q15032 1099 aaKnown RBP28.79■■■□□ 2.2
ROM1-201ENST00000278833 UBAC1Q9BSL1 405 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 TFCP2L1Q9NZI6 479 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 CNTNAP4Q9C0A0 1308 aa28.79■■■□□ 2.2
ROM1-201ENST00000278833 BTBD18B2RXH4 712 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 SMC2O95347 1197 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 SLC10A5Q5PT55 438 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 RC3H1Q5TC82 1133 aaKnown RBP28.78■■■□□ 2.2
ROM1-201ENST00000278833 AMIGO3Q86WK7 504 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 CLIC6Q96NY7 704 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 PTPN14Q15678 1187 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 CNNM3Q8NE01 707 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 CCDC112Q8NEF3 446 aa28.78■■■□□ 2.2
ROM1-201ENST00000278833 NRDCO43847 1150 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 RRP12Q5JTH9 1297 aaKnown RBP28.77■■■□□ 2.2
ROM1-201ENST00000278833 SMIM5Q71RC9 77 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 ADGRA1Q86SQ6 560 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 TRIML1Q8N9V2 468 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 MIGA1Q8NAN2 632 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 TSC1Q92574 1164 aa28.77■■■□□ 2.2
ROM1-201ENST00000278833 FAM177BA6PVY3 158 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 GNPATO15228 680 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 PNOCQ13519 176 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 LONRF3Q496Y0 759 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 ARMCX5Q6P1M9 558 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 OLFM4Q6UX06 510 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 TMC6Q7Z403 805 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 FBXW7Q969H0 707 aa28.76■■■□□ 2.2
ROM1-201ENST00000278833 SRPRBQ9Y5M8 271 aaKnown RBP28.76■■■□□ 2.2
ROM1-201ENST00000278833 TNKSO95271 1327 aa28.76■■■□□ 2.19
ROM1-201ENST00000278833 USP27XA6NNY8 438 aa28.76■■■□□ 2.19
ROM1-201ENST00000278833 UBE2Q2LH0YL09 131 aa28.76■■■□□ 2.19
ROM1-201ENST00000278833 IGSF3O75054 1194 aa28.76■■■□□ 2.19
ROM1-201ENST00000278833 SFPQP23246 707 aaKnown RBP eCLIP28.76■■■□□ 2.19
ROM1-201ENST00000278833 RBM28Q9NW13 759 aaKnown RBP28.76■■■□□ 2.19
ROM1-201ENST00000278833 MYH2Q9UKX2 1941 aa28.75■■■□□ 2.19
ROM1-201ENST00000278833 KANK3Q6NY19 840 aa28.75■■■□□ 2.19
ROM1-201ENST00000278833 CALM1P0DP23 149 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 CALM2P0DP24 149 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 CALM3P0DP25 149 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 SARSP49591 514 aaKnown RBP28.74■■■□□ 2.19
ROM1-201ENST00000278833 NT5C2P49902 561 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 FUT2Q10981 343 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 BAZ2AQ9UIF9 1905 aaKnown RBP28.74■■■□□ 2.19
ROM1-201ENST00000278833 PRPF3O43395 683 aaKnown RBP28.74■■■□□ 2.19
ROM1-201ENST00000278833 XBP1P17861 261 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 NCBP1Q09161 790 aaKnown RBP28.74■■■□□ 2.19
ROM1-201ENST00000278833 CAVIN4Q5BKX8 364 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 CT47A1Q5JQC4 288 aaPredicted RBP28.74■■■□□ 2.19
ROM1-201ENST00000278833 TOMM22Q9NS69 142 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 PCDHA5Q9Y5H7 936 aa28.74■■■□□ 2.19
ROM1-201ENST00000278833 ZKSCAN3Q9BRR0 538 aa28.73■■■□□ 2.19
ROM1-201ENST00000278833 RAI14Q9P0K7 980 aa28.73■■■□□ 2.19
ROM1-201ENST00000278833 DACH1Q9UI36 760 aa28.73■■■□□ 2.19
ROM1-201ENST00000278833 KCNJ14Q9UNX9 436 aa28.73■■■□□ 2.19
ROM1-201ENST00000278833 SRCAPQ6ZRS2 3230 aa28.73■■■□□ 2.19
ROM1-201ENST00000278833 UBR3Q6ZT12 1888 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 DDAH1O94760 285 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 BMP15O95972 392 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 ERFEQ4G0M1 354 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 FBXO33Q7Z6M2 555 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 FOXP4Q8IVH2 680 aaPredicted RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 ZSCAN10Q96SZ4 725 aaPredicted RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 PDGFDQ9GZP0 370 aaPredicted RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 RTCBQ9Y3I0 505 aaKnown RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 CCP110O43303 1012 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 RPS6KA4O75676 772 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 POSTNQ15063 836 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 E4F1Q66K89 784 aaPredicted RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 ENAHQ8N8S7 591 aaPredicted RBP28.72■■■□□ 2.19
ROM1-201ENST00000278833 MLKLQ8NB16 471 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 SPATA20Q8TB22 786 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms