RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
SFXN5-201ENST00000272433 GNA11P29992 359 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 GRM1Q13255 1194 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
SFXN5-201ENST00000272433 MASTLQ96GX5 879 aa12.67□□□□□ -0.38
SFXN5-201ENST00000272433 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
SFXN5-201ENST00000272433 ZDHHC9Q9Y397 364 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
SFXN5-201ENST00000272433 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
SFXN5-201ENST00000272433 GDF11O95390 407 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 NFAT5O94916 1531 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 AOC3Q16853 763 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
SFXN5-201ENST00000272433 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 ZNF202O95125 648 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 SFPQP23246 707 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■■■ 27.1
SFXN5-201ENST00000272433 TXKP42681 527 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 SP4Q02446 784 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
SFXN5-201ENST00000272433 TTC38Q5R3I4 469 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 SUPT20HQ8NEM7 779 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.38
SFXN5-201ENST00000272433 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
SFXN5-201ENST00000272433 GYS1P13807 737 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 SLC16A2P36021 539 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
SFXN5-201ENST00000272433 CCNT1O60563 726 aaKnown RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 TMX1Q9H3N1 280 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 SCAF8Q9UPN6 1271 aaKnown RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 ASIC1P78348 528 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 NOSTRINQ8IVI9 506 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 PCDHA7Q9UN72 937 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 NALCNQ8IZF0 1738 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 BRIP1Q9BX63 1249 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
SFXN5-201ENST00000272433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.393e-6■■■□□ 18.3
SFXN5-201ENST00000272433 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
SFXN5-201ENST00000272433 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 INF2Q27J81 1249 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 COL23A1Q86Y22 540 aaPredicted RBP12.63□□□□□ -0.39
SFXN5-201ENST00000272433 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 ERCC3P19447 782 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
SFXN5-201ENST00000272433 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 BMP15O95972 392 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
SFXN5-201ENST00000272433 CFBP00751 764 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 CDC27P30260 824 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 CDC25AP30304 524 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
SFXN5-201ENST00000272433 UBASH3AP57075 661 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
SFXN5-201ENST00000272433 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 BAZ2BQ9UIF8 2168 aaKnown RBP12.62□□□□□ -0.39
SFXN5-201ENST00000272433 SCG2P13521 617 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 C16orf45Q96MC5 204 aaPredicted RBP12.62□□□□□ -0.39
SFXN5-201ENST00000272433 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
SFXN5-201ENST00000272433 CDK8P49336 464 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 CTR9Q6PD62 1173 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 CEP89Q96ST8 783 aa12.62□□□□□ -0.39
SFXN5-201ENST00000272433 MTIF2P46199 727 aaKnown RBP12.61□□□□□ -0.39
SFXN5-201ENST00000272433 ICA1Q05084 483 aa12.61□□□□□ -0.39
SFXN5-201ENST00000272433 TNIP1Q15025 636 aa12.61□□□□□ -0.39
SFXN5-201ENST00000272433 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
SFXN5-201ENST00000272433 MNS1Q8NEH6 495 aa12.61□□□□□ -0.39
SFXN5-201ENST00000272433 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms