RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.34■■□□□ 1.65
CDR2-201ENST00000268383 ARHGAP6O43182 974 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 PNMA6AP0CW24 399 aaPredicted RBP25.34■■□□□ 1.65
CDR2-201ENST00000268383 STAMQ92783 540 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 STK36Q9NRP7 1315 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 TADA3O75528 432 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 SLC5A1P13866 664 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 ZNF18P17022 549 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 MPHOSPH8Q99549 860 aa25.34■■□□□ 1.65
CDR2-201ENST00000268383 CYP2D7A0A087X1C5 515 aa25.33■■□□□ 1.65
CDR2-201ENST00000268383 MORC3Q14149 939 aa25.33■■□□□ 1.65
CDR2-201ENST00000268383 SUSD4Q5VX71 490 aa25.33■■□□□ 1.65
CDR2-201ENST00000268383 KRT23Q9C075 422 aa25.33■■□□□ 1.65
CDR2-201ENST00000268383 ACTN4O43707 911 aaKnown RBP25.33■■□□□ 1.64
CDR2-201ENST00000268383 SPECC1LQ69YQ0 1117 aa25.33■■□□□ 1.64
CDR2-201ENST00000268383 ZNF654Q8IZM8 581 aa25.33■■□□□ 1.64
CDR2-201ENST00000268383 NUP98P52948 1817 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 PLA2G4AP47712 749 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 SARSP49591 514 aaKnown RBP25.32■■□□□ 1.64
CDR2-201ENST00000268383 FANCBQ8NB91 859 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 SLIT2O94813 1529 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 CCP110O43303 1012 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 BMS1Q14692 1282 aaKnown RBP25.32■■□□□ 1.64
CDR2-201ENST00000268383 RILPL1Q5EBL4 403 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 ZSWIM4Q9H7M6 989 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 CNNM2Q9H8M5 875 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 LRP2BPQ9P2M1 347 aa25.32■■□□□ 1.64
CDR2-201ENST00000268383 ZSCAN12O43309 604 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 WASF1Q92558 559 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 ABCF2Q9UG63 623 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 ERICH2A1L162 156 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 SOWAHDA6NJG2 315 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
CDR2-201ENST00000268383 STAG1Q8WVM7 1258 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 FOXP1Q9H334 677 aaPredicted RBP25.31■■□□□ 1.64
CDR2-201ENST00000268383 MRPL44Q9H9J2 332 aaKnown RBP25.31■■□□□ 1.64
CDR2-201ENST00000268383 BTG4Q9NY30 223 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 LRP6O75581 1613 aa25.31■■□□□ 1.64
CDR2-201ENST00000268383 DEXIO95424 95 aa25.3■■□□□ 1.64
CDR2-201ENST00000268383 CASQ1P31415 396 aa25.3■■□□□ 1.64
CDR2-201ENST00000268383 MROH5Q6ZUA9 1318 aa25.3■■□□□ 1.64
CDR2-201ENST00000268383 DHX8Q14562 1220 aaKnown RBP25.3■■□□□ 1.64
CDR2-201ENST00000268383 SART3Q15020 963 aaKnown RBP25.3■■□□□ 1.64
CDR2-201ENST00000268383 TEX35Q5T0J7 233 aa25.3■■□□□ 1.64
CDR2-201ENST00000268383 HOOK1Q9UJC3 728 aaKnown RBP25.3■■□□□ 1.64
CDR2-201ENST00000268383 EVX2Q03828 476 aa25.29■■□□□ 1.64
CDR2-201ENST00000268383 ENOX1Q8TC92 643 aaKnown RBP25.29■■□□□ 1.64
CDR2-201ENST00000268383 RAI14Q9P0K7 980 aa25.29■■□□□ 1.64
CDR2-201ENST00000268383 SRPRBQ9Y5M8 271 aaKnown RBP25.29■■□□□ 1.64
CDR2-201ENST00000268383 MLKLQ8NB16 471 aa25.29■■□□□ 1.64
CDR2-201ENST00000268383 SLAIN2Q9P270 581 aa25.29■■□□□ 1.64
CDR2-201ENST00000268383 SOS2Q07890 1332 aaPredicted RBP25.29■■□□□ 1.64
CDR2-201ENST00000268383 POLR3GO15318 223 aaPredicted RBP25.28■■□□□ 1.64
CDR2-201ENST00000268383 PPARAQ07869 468 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 NT5DC1Q5TFE4 455 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 TMCO3Q6UWJ1 677 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 UBAC1Q9BSL1 405 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 NACAP1Q9BZK3 213 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 LZTFL1Q9NQ48 299 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 ITGB4P16144 1822 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 TNKSO95271 1327 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 CYP7A1P22680 504 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 ZNF34Q8IZ26 560 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 RGS22Q8NE09 1264 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 ZRANB2O95218 330 aaKnown RBP eCLIP25.28■■□□□ 1.64
CDR2-201ENST00000268383 PLEKHA8P1O95397 391 aa25.28■■□□□ 1.64
CDR2-201ENST00000268383 MYH2Q9UKX2 1941 aa25.27■■□□□ 1.64
CDR2-201ENST00000268383 NR1I3Q14994 352 aa25.27■■□□□ 1.64
CDR2-201ENST00000268383 MYH6P13533 1939 aa25.27■■□□□ 1.64
CDR2-201ENST00000268383 STX10O60499 249 aa25.27■■□□□ 1.64
CDR2-201ENST00000268383 NOL10Q9BSC4 688 aaKnown RBP25.27■■□□□ 1.64
CDR2-201ENST00000268383 SASH3O75995 380 aa25.26■■□□□ 1.63
CDR2-201ENST00000268383 TUBB4AP04350 444 aa25.26■■□□□ 1.63
CDR2-201ENST00000268383 ZNF174Q15697 407 aa25.26■■□□□ 1.63
CDR2-201ENST00000268383 NUTM2AQ8IVF1 878 aaPredicted RBP25.26■■□□□ 1.63
CDR2-201ENST00000268383 TFRCP02786 760 aaKnown RBP25.26■■□□□ 1.63
CDR2-201ENST00000268383 PPP2R3AQ06190 1150 aa25.26■■□□□ 1.63
CDR2-201ENST00000268383 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
CDR2-201ENST00000268383 KIFC2Q96AC6 838 aa25.26■■□□□ 1.63
CDR2-201ENST00000268383 ZCCHC17Q9NP64 241 aaKnown RBP25.26■■□□□ 1.63
CDR2-201ENST00000268383 V9GY48 417 aaPredicted RBP25.26■■□□□ 1.63
CDR2-201ENST00000268383 EFCAB8A8MWE9 144 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 PLCD1P51178 756 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 MAP3K9P80192 1104 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 RBL2Q08999 1139 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 PKN1Q16512 942 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 FCHSD1Q86WN1 690 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 CCDC34Q96HJ3 373 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 DYNLL1P63167 89 aaKnown RBP25.25■■□□□ 1.63
CDR2-201ENST00000268383 RAD9BQ6WBX8 426 aa25.25■■□□□ 1.63
CDR2-201ENST00000268383 CCDC12Q8WUD4 166 aaPredicted RBP25.25■■□□□ 1.63
CDR2-201ENST00000268383 GYG1P46976 350 aa25.24■■□□□ 1.63
CDR2-201ENST00000268383 APTXQ7Z2E3 356 aaKnown RBP25.24■■□□□ 1.63
CDR2-201ENST00000268383 DPYDQ12882 1025 aa25.24■■□□□ 1.63
CDR2-201ENST00000268383 CREBRFQ8IUR6 639 aa25.24■■□□□ 1.63
CDR2-201ENST00000268383 BLZF1Q9H2G9 400 aa25.24■■□□□ 1.63
CDR2-201ENST00000268383 MRFAP1Q9Y605 127 aa25.24■■□□□ 1.63
CDR2-201ENST00000268383 TRIM75PA6NK02 468 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 SEC23AQ15436 765 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 ENAHQ8N8S7 591 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms