RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 MYLK4Q86YV6 388 aaPredicted RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 TSKSQ9UJT2 592 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PPIP5K1Q6PFW1 1433 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PARP9Q8IXQ6 854 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 DHX58Q96C10 678 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PAG1Q9NWQ8 432 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 ZRANB1Q9UGI0 708 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 FLOT1O75955 427 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 HNRNPCP07910 306 aaKnown RBP eCLIP6.33□□□□□ -1.4
VCAN-201ENST00000265077 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 TAF11Q15544 211 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 CCDC63Q8NA47 563 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 GPT2Q8TD30 523 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 LRRC2Q9BYS8 371 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 THEGQ9P2T0 379 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 MPRIPQ6WCQ1 1025 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 MTUS1Q9ULD2 1270 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 HLA-DOAP06340 250 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 TSPY3P0CV98 308 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 TSPY8P0CW00 308 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 JARID2Q92833 1246 aaPredicted RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 HSP90AA5PQ58FG0 334 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 ANKRD13DQ6ZTN6 518 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PCYT1AP49585 367 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 MYO1EQ12965 1108 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 SMC1BQ8NDV3 1235 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 MEIS3Q99687 375 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 NKIRAS1Q9NYS0 192 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 SLC8A3P57103 927 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 LRMPQ12912 555 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 CBX8Q9HC52 389 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 URB2Q14146 1524 aaKnown RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 RCSD1Q6JBY9 416 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
VCAN-201ENST00000265077 FGD4Q96M96 766 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 ABCC2Q92887 1545 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PHLPP2Q6ZVD8 1323 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 CASQ2O14958 399 aaPredicted RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 RPS6KB1P23443 525 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 PAX7P23759 505 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 CALCOCO2Q13137 446 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 SELENOSQ9BQE4 189 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 KCNH3Q9ULD8 1083 aa6.33□□□□□ -1.4
VCAN-201ENST00000265077 UTP11Q9Y3A2 253 aaKnown RBP6.33□□□□□ -1.4
VCAN-201ENST00000265077 KARSQ15046 597 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 SAMM50Q9Y512 469 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 RNF40O75150 1001 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 GMNNO75496 209 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 SFSWAPQ12872 951 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 LINS1Q8NG48 757 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 NAP1L4Q99733 375 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 KLC4Q9NSK0 619 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 PSD3Q9NYI0 1048 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 KDM5CP41229 1560 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 CCDC80Q76M96 950 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 UBAP1Q9NZ09 502 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 GUCA1BQ9UMX6 200 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 PLCD1P51178 756 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 ADCY2Q08462 1091 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 ANO1Q5XXA6 986 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 TMTC1Q8IUR5 882 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 CCDC51Q96ER9 411 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 SHROOM2Q13796 1616 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 VIMP08670 466 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 HNRNPH1P31943 449 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 ACTN3Q08043 901 aaPredicted RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 PPP2R5EQ16537 467 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 UTP6Q9NYH9 597 aaKnown RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 MYH3P11055 1940 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 SMIM23A6NLE4 172 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 MLKLQ8NB16 471 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 MSANTD4Q8NCY6 345 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 CLSTN2Q9H4D0 955 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 TULP2O00295 520 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 NMIQ13287 307 aaPredicted RBP6.32□□□□□ -1.4
VCAN-201ENST00000265077 CCDC14Q49A88 953 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 KRT79Q5XKE5 535 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 C8orf74Q6P047 294 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 NOX5Q96PH1 765 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 PHF8Q9UPP1 1060 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 TM6SF1Q9BZW5 370 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 HOMER3Q9NSC5 361 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 ADAMTS12P58397 1594 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 RIMS2Q9UQ26 1411 aa6.32□□□□□ -1.4
VCAN-201ENST00000265077 IDI1Q13907 227 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 BIN2Q9UBW5 565 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 369.4 ms