RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 VPS54Q9P1Q0 977 aa22.6■■□□□ 1.21
NEIL3-201ENST00000264596 ZHX1Q9UKY1 873 aaPredicted RBP22.6■■□□□ 1.21
NEIL3-201ENST00000264596 AKAP17AQ02040 695 aaKnown RBP22.6■■□□□ 1.21
NEIL3-201ENST00000264596 ITPK1Q13572 414 aa22.6■■□□□ 1.21
NEIL3-201ENST00000264596 LRRN4CLQ8ND94 238 aa22.6■■□□□ 1.21
NEIL3-201ENST00000264596 NFE2L3Q9Y4A8 694 aa22.6■■□□□ 1.21
NEIL3-201ENST00000264596 CYP2D7A0A087X1C5 515 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 LOC102724428A0A0B4J2F2 783 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 CDK11BP21127 795 aaKnown RBP22.59■■□□□ 1.21
NEIL3-201ENST00000264596 SIK1P57059 783 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 SEC23AQ15436 765 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 SHISA4Q96DD7 197 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 L2HGDHQ9H9P8 463 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 DNAI1Q9UI46 699 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 SRPRBQ9Y5M8 271 aaKnown RBP22.59■■□□□ 1.21
NEIL3-201ENST00000264596 PLCH1Q4KWH8 1693 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 PRDM1O75626 825 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 FBXO38Q6PIJ6 1188 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 ELOA2Q8IYF1 753 aaPredicted RBP22.59■■□□□ 1.21
NEIL3-201ENST00000264596 MTA3Q9BTC8 594 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 TMX1Q9H3N1 280 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 DDX41Q9UJV9 622 aaKnown RBP22.59■■□□□ 1.21
NEIL3-201ENST00000264596 CEP131Q9UPN4 1083 aa22.59■■□□□ 1.21
NEIL3-201ENST00000264596 CCP110O43303 1012 aa22.58■■□□□ 1.21
NEIL3-201ENST00000264596 MYO1BO43795 1136 aa22.58■■□□□ 1.21
NEIL3-201ENST00000264596 DYNLL1P63167 89 aaKnown RBP22.58■■□□□ 1.21
NEIL3-201ENST00000264596 RTL9Q8NET4 1388 aa22.58■■□□□ 1.2
NEIL3-201ENST00000264596 ZNF579Q8NAF0 562 aaKnown RBP22.58■■□□□ 1.2
NEIL3-201ENST00000264596 MYH6P13533 1939 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 ACTN4O43707 911 aaKnown RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 ETF1P62495 437 aaKnown RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 MORC3Q14149 939 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 ENAHQ8N8S7 591 aaPredicted RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 MLKLQ8NB16 471 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 RNF26Q9BY78 433 aaPredicted RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 SARSP49591 514 aaKnown RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 RCAN1P53805 252 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 DDB1Q16531 1140 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 EARS2Q5JPH6 523 aaKnown RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 NT5DC1Q5TFE4 455 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 DHX58Q96C10 678 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 DACH1Q9UI36 760 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 CICQ96RK0 1608 aaPredicted RBP22.57■■□□□ 1.2
NEIL3-201ENST00000264596 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
NEIL3-201ENST00000264596 ERCC6LQ2NKX8 1250 aa22.56■■□□□ 1.2
NEIL3-201ENST00000264596 ZSCAN10Q96SZ4 725 aaPredicted RBP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 CDC5LQ99459 802 aaKnown RBP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 COL1A1P02452 1464 aaPredicted RBP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 PLEKHA8P1O95397 391 aa22.56■■□□□ 1.2
NEIL3-201ENST00000264596 CCDC93Q567U6 631 aa22.56■■□□□ 1.2
NEIL3-201ENST00000264596 C3orf67Q6ZVT6 689 aa22.56■■□□□ 1.2
NEIL3-201ENST00000264596 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 ANAPC4Q9UJX5 808 aa22.56■■□□□ 1.2
NEIL3-201ENST00000264596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.56■■□□□ 1.2
NEIL3-201ENST00000264596 TRIM75PA6NK02 468 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 XBP1P17861 261 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 PKN1Q16512 942 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 IFIT1BQ5T764 474 aaKnown RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 ENOX1Q8TC92 643 aaKnown RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 V9GY48 417 aaPredicted RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 TUBB4AP04350 444 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 ZNF18P17022 549 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 KRT2P35908 639 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 TMEM139Q8IV31 216 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 ANKRD18AQ8IVF6 992 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 REXO1L1PQ8IX06 675 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 FAM177A1Q8N128 213 aaPredicted RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 EPSTI1Q96J88 318 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 SAMSN1Q9NSI8 373 aaKnown RBP22.55■■□□□ 1.2
NEIL3-201ENST00000264596 MYH2Q9UKX2 1941 aa22.55■■□□□ 1.2
NEIL3-201ENST00000264596 MYH14Q7Z406 1995 aaKnown RBP22.54■■□□□ 1.2
NEIL3-201ENST00000264596 ZNF804BA4D1E1 1349 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 AFMP43652 599 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 TRIM65Q6PJ69 517 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 CATIPQ7Z7H3 387 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 MED15Q96RN5 788 aa22.54■■□□□ 1.2
NEIL3-201ENST00000264596 BAZ2AQ9UIF9 1905 aaKnown RBP22.54■■□□□ 1.2
NEIL3-201ENST00000264596 COL16A1Q07092 1604 aaPredicted RBP22.54■■□□□ 1.2
NEIL3-201ENST00000264596 A0A087X0B3 334 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 IGSF3O75054 1194 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 ADKP55263 362 aaKnown RBP22.53■■□□□ 1.2
NEIL3-201ENST00000264596 ERFEQ4G0M1 354 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 KANK3Q6NY19 840 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 BAG1Q99933 345 aaPredicted RBP22.53■■□□□ 1.2
NEIL3-201ENST00000264596 PHLPP2Q6ZVD8 1323 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 TBX2Q13207 712 aaPredicted RBP22.53■■□□□ 1.2
NEIL3-201ENST00000264596 TRIML1Q8N9V2 468 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 PHF20Q9BVI0 1012 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 TAF1P21675 1872 aa22.53■■□□□ 1.2
NEIL3-201ENST00000264596 ARHGAP6O43182 974 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 CASP1P29466 404 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 SPECC1LQ69YQ0 1117 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 PPP2R2CQ9Y2T4 447 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 MORC2Q9Y6X9 1032 aaPredicted RBP22.52■■□□□ 1.2
NEIL3-201ENST00000264596 LAMB2P55268 1798 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 DUOX1Q9NRD9 1551 aa22.52■■□□□ 1.2
NEIL3-201ENST00000264596 WNT7AO00755 349 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms