RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MROH5Q6ZUA9 1318 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 SH2B2O14492 632 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 ATP2B3Q16720 1220 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 GLIS3Q8NEA6 775 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 RIPK3Q9Y572 518 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 PSMD14O00487 310 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 UBE4AQ14139 1066 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 FTSJ3Q8IY81 847 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 PSMD1Q99460 953 aa6.9□□□□□ -1.3
TOPBP1-201ENST00000260810 RPS6KB1P23443 525 aa6.9□□□□□ -1.3
TOPBP1-201ENST00000260810 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.3
TOPBP1-201ENST00000260810 STK36Q9NRP7 1315 aa6.9□□□□□ -1.3
TOPBP1-201ENST00000260810 FAM155AB1AL88 458 aaPredicted RBP6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 HAND2P61296 217 aa6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 SPATA20Q8TB22 786 aa6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 hCG_1642624A0A1W2PR95 340 aa6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 EIF5BO60841 1220 aaKnown RBP6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 PRDM1O75626 825 aa6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 STAG1Q8WVM7 1258 aa6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.31
TOPBP1-201ENST00000260810 ZDHHC15Q96MV8 337 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 SYT1P21579 422 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 PARP10Q53GL7 1025 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 TTC5Q8N0Z6 440 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 CXCL16Q9H2A7 254 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 GDPD2Q9HCC8 539 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 TEX13AQ9BXU3 409 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 ZBTB47Q9UFB7 747 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 DSCC1Q9BVC3 393 aa6.89□□□□□ -1.31
TOPBP1-201ENST00000260810 FAM237AA0A1B0GTK4 181 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 MTMR14Q8NCE2 650 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 ACER1Q8TDN7 264 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 HPSEQ9Y251 543 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 PALM3A6NDB9 673 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 IPO8O15397 1037 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 EPS15P42566 896 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 ERCC4Q92889 916 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 GTF3C6Q969F1 213 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 MS4A4AQ96JQ5 239 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 TANC1Q9C0D5 1861 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 ANKRD36A6QL64 1941 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 AKR1B1P15121 316 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 IGFBP6P24592 240 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 NCAPHQ15003 741 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 CYP2W1Q8TAV3 490 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 ANAPC1Q9H1A4 1944 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 EHHADHQ08426 723 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 SLC4A8Q2Y0W8 1093 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 MAGEB6Q8N7X4 407 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 PASKQ96RG2 1323 aa6.88□□□□□ -1.31
TOPBP1-201ENST00000260810 MEIS2O14770 477 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 APOA5Q6Q788 366 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 SAMD7Q7Z3H4 446 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 C9orf78Q9NZ63 289 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 A0A0U1RQJ8 604 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 CTAGE5O15320 804 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 EVI5LQ96CN4 794 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 STK31Q9BXU1 1019 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 MCCD1P59942 119 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 SLC9C2Q5TAH2 1124 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 RNF113AO15541 343 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 E2F4Q16254 413 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 SBK1Q52WX2 424 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 IRF2BP1Q8IU81 584 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 APPBP2Q92624 585 aa6.87□□□□□ -1.31
TOPBP1-201ENST00000260810 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.312e-8■■■■□ 20.3
TOPBP1-201ENST00000260810 LRRN2O75325 713 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 WNT7BP56706 349 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 GHRHRQ02643 423 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 C16orf86Q6ZW13 317 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 HAS1Q92839 578 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 SPDYE2BA6NHP3 402 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 MBD4O95243 580 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 SPDYE6P0CI01 402 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 NFKBIBQ15653 356 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 ZBTB48P10074 688 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 NR5A1Q13285 461 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 IFIT5Q13325 482 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 AATFQ9NY61 560 aaKnown RBP eCLIP6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 LIG1P18858 919 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 MCMDC2Q4G0Z9 681 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms