RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CDC5LQ99459 802 aaKnown RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 SOS1Q07889 1333 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 FYB2Q5VWT5 728 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 MCM8Q9UJA3 840 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 RPAP1Q9BWH6 1393 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 PSMA7O14818 248 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 BMP15O95972 392 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 CCDC13Q8IYE1 715 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 RGS16O15492 202 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 CTCFP49711 727 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 MRPS35P82673 323 aaKnown RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 MCM10Q7L590 875 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 EPN1Q9Y6I3 576 aaPredicted RBP14.3□□□□□ -0.12
VAMP4-201ENST00000236192 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
VAMP4-201ENST00000236192 C2orf54Q08AI8 447 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 POSTNQ15063 836 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 VPS52Q8N1B4 723 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-201ENST00000236192 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 CTNND2Q9UQB3 1225 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 AP5Z1O43299 807 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
VAMP4-201ENST00000236192 SBNO1A3KN83 1393 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 PPP1R37O75864 691 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
VAMP4-201ENST00000236192 GNAT1P11488 350 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 CMA1P23946 247 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 CCND1P24385 295 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 OR8K1Q8NGG5 319 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 MIS12Q9H081 205 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 TBC1D2BQ9UPU7 963 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 EVI5O60447 810 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 DDR1Q08345 913 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 IQCB1Q15051 598 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
VAMP4-201ENST00000236192 NME8Q8N427 588 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 RMI1Q9H9A7 625 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 RCOR1Q9UKL0 485 aa14.29□□□□□ -0.12
VAMP4-201ENST00000236192 CTNND1O60716 968 aaKnown RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 A0A087WWV3 80 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 HDGFP51858 240 aaKnown RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 RBL2Q08999 1139 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 MYLK4Q86YV6 388 aaPredicted RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 KIRREL3Q8IZU9 778 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 PSMB7Q99436 277 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 HINFPQ9BQA5 517 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 FSBPO95073 299 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 CHGBP05060 677 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 GUCY2DQ02846 1103 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 ST13P4Q8IZP2 240 aaPredicted RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 CARD14Q9BXL6 1004 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 A1CFQ9NQ94 594 aaKnown RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
VAMP4-201ENST00000236192 ACTN4O43707 911 aaKnown RBP14.28□□□□□ -0.12
VAMP4-201ENST00000236192 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.12
VAMP4-201ENST00000236192 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.12
VAMP4-201ENST00000236192 L1RE1Q9UN81 338 aa14.27□□□□□ -0.12
VAMP4-201ENST00000236192 MAP3K7O43318 606 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 CASP14P31944 242 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 CFAP157Q5JU67 520 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 MIS18AQ9NYP9 233 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 CDHR2Q9BYE9 1310 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 CASQ2O14958 399 aaPredicted RBP14.27□□□□□ -0.13
VAMP4-201ENST00000236192 KRT13P13646 458 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 RUBCNQ92622 972 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 CCDC62Q6P9F0 684 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
VAMP4-201ENST00000236192 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 ZFATQ9P243 1243 aa14.27□□□□□ -0.13
VAMP4-201ENST00000236192 VWA3AA6NCI4 1184 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 AHCYL1O43865 530 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms