RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
MSH6-201ENST00000234420 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
MSH6-201ENST00000234420 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 PCYT1AP49585 367 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
MSH6-201ENST00000234420 FAM182BQ5T319 152 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 IFT20Q8IY31 132 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 ZNF653Q96CK0 615 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 PLEKHA4Q9H4M7 779 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 CCDC87Q9NVE4 849 aa12.31□□□□□ -0.44
MSH6-201ENST00000234420 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
MSH6-201ENST00000234420 GIPC1O14908 333 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 SAT1P21673 171 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 SERPINB6P35237 376 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 I3L4J1 428 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 BCAS4Q8TDM0 211 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 TTC19Q6DKK2 380 aaPredicted RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 ASIC1P78348 528 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 MTRQ99707 1265 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
MSH6-201ENST00000234420 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
MSH6-201ENST00000234420 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 KRT10P13645 584 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 GFAPP14136 432 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 KIAA1841Q6NSI8 718 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
MSH6-201ENST00000234420 SPAG1Q07617 926 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 PYM1Q9BRP8 204 aaKnown RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 SATB2Q9UPW6 733 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 TRIM37O94972 964 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 LEO1Q8WVC0 666 aaPredicted RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 ALKBH8Q96BT7 664 aaKnown RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 EYA3Q99504 573 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 RAP1GDS1P52306 607 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.446e-6■□□□□ 9.2
MSH6-201ENST00000234420 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 hCG_2014768A0A024R1R8 64 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 ITIH3Q06033 890 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 PSMB7Q99436 277 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 CCT5P48643 541 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 ARMC9Q7Z3E5 817 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 MRPS27Q92552 414 aaKnown RBP12.29□□□□□ -0.44
MSH6-201ENST00000234420 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
MSH6-201ENST00000234420 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 XPAP23025 273 aaPredicted RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 GLG1Q92896 1179 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSH6-201ENST00000234420 PSMA7O14818 248 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 USP37Q86T82 979 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 CCT6AP40227 531 aaKnown RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 CEP70Q8NHQ1 597 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 YIPF2Q9BWQ6 316 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 AKR1B15C9JRZ8 316 aaPredicted RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 STX10O60499 249 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 RNF40O75150 1001 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 PDE6AP16499 860 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 FBXO2Q9UK22 296 aaPredicted RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 TRPA1O75762 1119 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 KRT15P19012 456 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 ZKSCAN8Q15776 578 aaPredicted RBP12.28□□□□□ -0.44
MSH6-201ENST00000234420 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
MSH6-201ENST00000234420 FAM83GA6ND36 823 aa12.27□□□□□ -0.44
MSH6-201ENST00000234420 ZFXP17010 805 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms