RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PPP2R2CQ9Y2T4 447 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 VWA3AA6NCI4 1184 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 ST7Q9NRC1 585 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 NFE2L3Q9Y4A8 694 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 PCDHB6Q9Y5E3 794 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 MROH5Q6ZUA9 1318 aa19.78■□□□□ 0.76
USB1-201ENST00000219281 SLC5A1P13866 664 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 ATP2B1P20020 1258 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 TDO2P48775 406 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 TBX2Q13207 712 aaPredicted RBP19.77■□□□□ 0.76
USB1-201ENST00000219281 NR5A1Q13285 461 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 BMS1Q14692 1282 aaKnown RBP19.77■□□□□ 0.76
USB1-201ENST00000219281 WTAPQ15007 396 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 TRMT44Q8IYL2 757 aaKnown RBP19.77■□□□□ 0.76
USB1-201ENST00000219281 MNS1Q8NEH6 495 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 UBXN4Q92575 508 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 SMARCE1Q969G3 411 aa19.77■□□□□ 0.76
USB1-201ENST00000219281 BAG1Q99933 345 aaPredicted RBP19.77■□□□□ 0.76
USB1-201ENST00000219281 RILPL1Q5EBL4 403 aa19.77■□□□□ 0.75
USB1-201ENST00000219281 FOXP1Q9H334 677 aaPredicted RBP19.77■□□□□ 0.75
USB1-201ENST00000219281 MYH3P11055 1940 aa19.77■□□□□ 0.75
USB1-201ENST00000219281 SARSP49591 514 aaKnown RBP19.76■□□□□ 0.75
USB1-201ENST00000219281 ADKP55263 362 aaKnown RBP19.76■□□□□ 0.75
USB1-201ENST00000219281 LCORLQ8N3X6 602 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 CARD6Q9BX69 1037 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 SEC31BQ9NQW1 1179 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 SLC4A4Q9Y6R1 1079 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 ZNF18P17022 549 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 MORC3Q14149 939 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 SART3Q15020 963 aaKnown RBP19.76■□□□□ 0.75
USB1-201ENST00000219281 NT5DC1Q5TFE4 455 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
USB1-201ENST00000219281 MLKLQ8NB16 471 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 OXER1Q8TDS5 423 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 NUP133Q8WUM0 1156 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 STAG1Q8WVM7 1258 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 AK7Q96M32 723 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 SRRTQ9BXP5 876 aaKnown RBP19.76■□□□□ 0.75
USB1-201ENST00000219281 FHOD1Q9Y613 1164 aa19.76■□□□□ 0.75
USB1-201ENST00000219281 ERICH2A1L162 156 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 PTF1AQ7RTS3 328 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 TC2NQ8N9U0 490 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 ENOX1Q8TC92 643 aaKnown RBP19.75■□□□□ 0.75
USB1-201ENST00000219281 DACH1Q9UI36 760 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 NID2Q14112 1375 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 BCL9LQ86UU0 1499 aa19.75■□□□□ 0.75
USB1-201ENST00000219281 DEXIO95424 95 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 KCNQ4P56696 695 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 SPECC1LQ69YQ0 1117 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 C8orf37Q96NL8 207 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 NACAP1Q9BZK3 213 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 TADA3O75528 432 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 TOGARAM2Q6ZUX3 1019 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 USP49Q70CQ1 688 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 SMARCC1Q92922 1105 aaPredicted RBP19.74■□□□□ 0.75
USB1-201ENST00000219281 NGLY1Q96IV0 654 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 MED15Q96RN5 788 aa19.74■□□□□ 0.75
USB1-201ENST00000219281 SAMSN1Q9NSI8 373 aaKnown RBP19.74■□□□□ 0.75
USB1-201ENST00000219281 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
USB1-201ENST00000219281 SRPRBQ9Y5M8 271 aaKnown RBP19.74■□□□□ 0.75
USB1-201ENST00000219281 ACTN4O43707 911 aaKnown RBP19.73■□□□□ 0.75
USB1-201ENST00000219281 NTSR2O95665 410 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 ZNF579Q8NAF0 562 aaKnown RBP19.73■□□□□ 0.75
USB1-201ENST00000219281 MIGA1Q8NAN2 632 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 CSRNP2Q9H175 543 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 CABP5Q9NP86 173 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 STX10O60499 249 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 CASQ1P31415 396 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 GNG11P61952 73 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 VPS72Q15906 364 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 PARP10Q53GL7 1025 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 FANCBQ8NB91 859 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 WDR24Q96S15 920 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 MPHOSPH8Q99549 860 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 ARGLU1Q9NWB6 273 aaPredicted RBP19.73■□□□□ 0.75
USB1-201ENST00000219281 RREB1Q92766 1687 aa19.73■□□□□ 0.75
USB1-201ENST00000219281 EFCAB8A8MWE9 144 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 PNMA6AP0CW24 399 aaPredicted RBP19.72■□□□□ 0.75
USB1-201ENST00000219281 GNAT2P19087 354 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 BCAMP50895 628 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 ZNF654Q8IZM8 581 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 LINC00116Q8NCU8 138 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 CEP131Q9UPN4 1083 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 CCDC196A0A1B0GTZ2 297 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 TMCO3Q6UWJ1 677 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 TRIML1Q8N9V2 468 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
USB1-201ENST00000219281 KANK3Q6NY19 840 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 PNPLA7Q6ZV29 1317 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 GOLGA6L9A6NEM1 432 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 SMIM5Q71RC9 77 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 EPC1Q9H2F5 836 aa19.71■□□□□ 0.75
USB1-201ENST00000219281 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 FAM205CA6NFA0 338 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 ZRANB2O95218 330 aaKnown RBP eCLIP19.7■□□□□ 0.74
USB1-201ENST00000219281 PLCD1P51178 756 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 NR1I3Q14994 352 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms