RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Gm12185Q5NCB2 835 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Herc4Q6PAV2 1057 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gbp9Q8BTS3 619 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pde6cQ91ZQ1 861 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 4933428M09RikQ9D3X3 192 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ccdc70Q9D9B0 223 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Stx12Q9ER00 274 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Col20a1Q923P0 1320 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Lrrc7Q80TE7 1490 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Zhx1P70121 873 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Prkab2Q6PAM0 271 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cct6aP80317 531 aaKnown RBP13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 YarsQ91WQ3 528 aaKnown RBP13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Uspl1Q3ULM6 1089 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gas7Q60780 421 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Atp1a2Q6PIE5 1020 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Spata18Q0P557 537 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pde5aQ8CG03 865 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Calcoco1Q8CGU1 691 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cnga4Q3UW12 575 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Myl10Q62082 202 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Znf667Q2TL60 609 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Retreg2Q6NS82 541 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ska2Q9CR46 120 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rreb1Q3UH06 1700 aaKnown RBP13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Dync1i1O88485 628 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Satb1Q60611 764 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pdzrn3Q69ZS0 1063 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rapgef5Q8C0Q9 814 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Edc4Q3UJB9 1406 aaKnown RBP13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Fmn2Q9JL04 1578 aa13.84□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cpb1B2RS76 415 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Heatr4E9Q357 955 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gm29094F6Q785 221 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Aldh1l2Q8K009 923 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ndufa8Q9DCJ5 172 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pfdn6Q03958 127 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gpcpd1Q8C0L9 675 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Galnt15Q9D2N8 638 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 4930548H24RikQ9D496 437 aa13.83□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Timm10P62073 90 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Fam135bQ9DAI6 1403 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gm4297D3YWB7 211 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Kif5aP33175 1027 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Miga2Q8BK03 593 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Iws1Q8C1D8 766 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Appbp2Q9DAX9 585 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gm3409A0A0G2JE67 319 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ubash3aQ3V3E1 624 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ccdc125Q5U465 500 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ccdc185Q3V118 621 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gucy2eP52785 1108 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ddx39aQ8VDW0 427 aaKnown RBP13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Atp1a4Q9WV27 1032 aa13.83□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Abcc2Q8VI47 1543 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Brd1E9PZ26 1189 aaKnown RBP13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 PparaP23204 468 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 PhbP67778 272 aaKnown RBP13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 ItkQ03526 625 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Birc2Q62210 612 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Tbc1d31Q6NXY1 996 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gm45140A0A0N4SUM8 220 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Tpx2A2APB8 745 aaKnown RBP13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Abcc6Q9R1S7 1498 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Stk10O55098 966 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Sox13Q04891 613 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Zfp202Q8C879 641 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Nrbp2Q91V36 499 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Eef1bO70251 225 aaKnown RBP13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Oxr1Q4KMM3 866 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 C130026I21RikQ8C898 291 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Znf467Q8JZL0 594 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gm11985A0A1B0GS61 206 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 1700029H14RikE9PY36 240 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Csrnp1P59054 583 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 NelfbQ8C4Y3 580 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Rmi1Q9D4G9 616 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 PzpQ61838 1495 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Becn2P0DM65 447 aa13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Acsl3Q9CZW4 720 aaKnown RBP13.82□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Prim1P20664 417 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Fen1P39749 378 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gpr162Q3UN16 588 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 DeptorQ570Y9 409 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ppp2r5bQ6PD28 497 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ankrd24Q80VM7 985 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Riox2Q8CD15 465 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Ccdc97Q9DBT3 340 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 AatfQ9JKX4 526 aaKnown RBP13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Arhgef12Q8R4H2 1543 aaKnown RBP13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Zfp397Q7TNK4 527 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Nop2Q922K7 793 aaKnown RBP13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Aox1O54754 1333 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Olfr247E9PVJ7 320 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Gm6583E9Q8Z1 469 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Olfr819K7N727 320 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Eif2ak4Q9QZ05 1648 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Casp2P29594 452 aa13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Nucb1Q02819 459 aaKnown RBP13.81□□□□□ -0.2
Col6a3-208ENSMUST00000188587 Zbtb45Q52KG4 520 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms