RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Slc27a1Q60714 646 aa18.31■□□□□ 0.52
Trim39-203ENSMUST00000113706 Hook1Q8BIL5 728 aa18.31■□□□□ 0.52
Trim39-203ENSMUST00000113706 DlatQ8BMF4 642 aa18.31■□□□□ 0.52
Trim39-203ENSMUST00000113706 Nell2Q61220 819 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Eif4enif1Q9EST3 983 aaKnown RBP18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Myoz2Q9JJW5 264 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Ecm29Q6PDI5 1840 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Zmym2Q9CU65 1376 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Fbln2P37889 1221 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Tfcp2Q9ERA0 502 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Tob2Q9JM55 345 aa18.3■□□□□ 0.52
Trim39-203ENSMUST00000113706 Tmtc2Q56A06 836 aa18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Znf18Q810A1 556 aa18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Hnrnpul1Q8VDM6 859 aaKnown RBP18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Lonrf3Q9D4H7 753 aa18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Adam7O35227 789 aa18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Gimap7Q8R379 293 aa18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 Prpf3Q922U1 683 aaKnown RBP18.29■□□□□ 0.52
Trim39-203ENSMUST00000113706 LrmpQ60664 539 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Fam89aQ14BJ1 175 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 DaglaQ6WQJ1 1044 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Triml1Q8BVP1 470 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Ubxn4Q8VCH8 506 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Pcdhb5Q91XZ5 792 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Mtmr2Q9Z2D1 643 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Igsf9bE9PZ19 1328 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Ccdc88aQ5SNZ0 1873 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Gm43638A0A0J9YU36 694 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Cyp3a25O09158 503 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 VrtnQ3SYK4 740 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Txnrd3Q99MD6 652 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Mei1Q9D4I2 1268 aa18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Acot9Q9R0X4 439 aaKnown RBP18.28■□□□□ 0.52
Trim39-203ENSMUST00000113706 Atp2b1G5E829 1220 aa18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Tm4sf1Q64302 202 aa18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Q8K2W9 541 aa18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Golph3lQ8R088 285 aaKnown RBP18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Rc3h1Q4VGL6 1130 aaKnown RBP18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Mboat7Q8CHK3 473 aa18.27■□□□□ 0.52
Trim39-203ENSMUST00000113706 Stx1aO35526 288 aa18.27■□□□□ 0.51
Trim39-203ENSMUST00000113706 Il7P10168 154 aa18.27■□□□□ 0.51
Trim39-203ENSMUST00000113706 Scg2Q03517 617 aa18.27■□□□□ 0.51
Trim39-203ENSMUST00000113706 Hmgn5Q9JL35 406 aa18.27■□□□□ 0.51
Trim39-203ENSMUST00000113706 Clip2Q9Z0H8 1047 aa18.27■□□□□ 0.51
Trim39-203ENSMUST00000113706 Cspp1B2RX88 1205 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 Cdk8Q8R3L8 464 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tulp1Q9Z273 543 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 Myo1bP46735 1107 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 Pcdhb14Q6PB90 796 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 Mad2l2Q9D752 211 aa18.26■□□□□ 0.51
Trim39-203ENSMUST00000113706 UncxO08934 530 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 MycbpapQ5SUV2 932 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Insm1Q63ZV0 521 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Atp2b4Q6Q477 1205 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ptf1aQ9QX98 324 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Pfkfb1P70266 471 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Dhx40Q6PE54 779 aaKnown RBP18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tspyl4Q8VD63 406 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 RabggtaQ9JHK4 567 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Gpaa1Q9WTK3 621 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Myh8P13542 1937 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Cyp4x1Q6A152 507 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ccp110Q7TSH4 1004 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 IqcgQ80W32 419 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tango6Q8C3S2 1079 aa18.25■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ampd3O08739 766 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Stag2O35638 1231 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Fam178bQ24JP3 464 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 RadxQ8C779 850 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 OplahQ8K010 1288 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Nrbp1Q99J45 535 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Mrps25Q9D125 171 aaKnown RBP18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Eya3P97480 510 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tbc1d2bQ3U0J8 965 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ndufb9Q9CQJ8 179 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 TicrrQ8BQ33 1889 aa18.24■□□□□ 0.51
Trim39-203ENSMUST00000113706 Csf1rP09581 977 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Pip5kl1Q6U7H8 395 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Larp6Q8BN59 492 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Fam186bD3Z420 943 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Kmt5bQ3U8K7 883 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tmem47Q9JJG6 181 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Frmpd3A0A140LIW3 1774 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 AaasP58742 546 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Cyp7b1Q60991 507 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tcp11l1Q8BTG3 509 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Zfp202Q8C879 641 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Rbm19Q8R3C6 952 aaKnown RBP18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Nop2Q922K7 793 aaKnown RBP18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Zbed3Q9D0L1 228 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Col5a2Q3U962 1497 aa18.23■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ppef2O35385 757 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tpm2P58774 284 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 MyrflQ3UN70 904 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Lrrc15Q80X72 579 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Haus7Q8BKT8 364 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Plekhg6Q8R0J1 787 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Nop14Q8R3N1 860 aaKnown RBP18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Trim11Q99PQ2 467 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Syt10Q9R0N4 523 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms