RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Fam163bQ8BUM6 167 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Mb21d2Q8C525 428 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 SncbQ91ZZ3 133 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 4930449I24RikQ9D5E3 319 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Polr2dQ9D7M8 142 aaKnown RBP8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Snx1Q9WV80 522 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pdrg1P59048 133 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Arhgef1Q61210 920 aaKnown RBP8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Fnbp1Q80TY0 616 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 OplahQ8K010 1288 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Arhgef6Q8K4I3 771 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tmem39aQ9CYC3 486 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ddx20Q9JJY4 825 aaKnown RBP8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Rims2Q9EQZ7 1530 aa8.56□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc152E9PX14 254 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Dnm1P39053 867 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Abcd1P48410 736 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Eya1P97767 591 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Flt3Q00342 1000 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Arhgef16Q3U5C8 713 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 CerkQ8K4Q7 531 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pcdhb3Q91XZ7 784 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Peg12Q9WVA7 283 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Abca14E9Q8F8 1683 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Setdb1O88974 1307 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gm28042B7ZCM9 1014 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gm29094F6Q785 221 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Sec24cG3X972 1096 aaKnown RBP8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Stim2P83093 746 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tax1bp1Q3UKC1 814 aaKnown RBP8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Clul1Q3ZRW6 464 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 DbnlQ62418 436 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Smc4Q8CG47 1286 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Znf445Q8R2V3 986 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 MthfsQ9D110 203 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Sf3a3Q9D554 501 aaKnown RBP8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Paip2Q9D6V8 124 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Echdc1Q9D9V3 322 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 IncenpQ9WU62 880 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 TnksQ6PFX9 1320 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Mroh1E0CZ22 1640 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Arid3cA6PWV5 409 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Hoxb7P09024 217 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Meis3P97368 378 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Slc7a1Q09143 622 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Trim80Q3V061 624 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pex1Q5BL07 1284 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Specc1Q5SXY1 1067 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Myo6Q64331 1265 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ift122Q6NWV3 1182 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Thap2Q9D305 217 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Mrpl12Q9DB15 201 aaKnown RBP8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 GgcxQ9QYC7 757 aa8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 CltcQ68FD5 1675 aaKnown RBP8.55□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gm28510A0A087WP28 240 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gm5580A0A0N4SVP8 411 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ttf2Q5NC05 1138 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 GopcQ8BH60 463 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Arhgef28P97433 1693 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Cnksr1A2A9K7 700 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Fbxl16A2RT62 479 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gm20425E9Q035 978 aaKnown RBP8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Myo1eE9Q634 1107 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Scgb2b19J3QM75 112 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pde8aO88502 823 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 PrphP15331 475 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Gfpt1P47856 697 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Lrrn4P59383 733 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Dnph1Q80VJ3 173 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tmem67Q8BR76 992 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Rint1Q8BZ36 792 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Dnm1lQ8K1M6 742 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 NhsB1AV60 1647 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Clcn6O35454 870 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Casp8O89110 480 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 AppP12023 770 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc138Q0VF22 680 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc129Q14B48 1034 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 TraddQ3U0V2 310 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Mum1l1Q4VA55 681 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Stkld1Q80YS9 662 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tecpr2Q3UH45 1423 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Eftud2O08810 971 aaKnown RBP8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Cyp2d10P24456 504 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pbx1P41778 430 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Slc8a1P70414 970 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tmem59lQ7TNI2 337 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tcp11l1Q8BTG3 509 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc150Q8CDI7 1110 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Usp15Q8R5H1 981 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc43Q9CR29 222 aaKnown RBP8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Q9D1Z2 194 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Nxnl2Q9D531 156 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ccdc97Q9DBT3 340 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Rabgef1Q9JM13 491 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pde3aQ9Z0X4 1141 aa8.54□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Chd4Q6PDQ2 1915 aaKnown RBP8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Asxl2Q8BZ32 1370 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Cyp2j7A0A140T8U1 504 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Tpp1O89023 562 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms