RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Dennd6aQ8BH65 605 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Sept11Q8C1B7 431 aaKnown RBP18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Rtn1Q8K0T0 780 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Klhl20Q8VCK5 604 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Gm7298A0A0N4SVU1 1476 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ect2Q07139 913 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ccdc92bQ5SUE3 299 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Fam170aQ66LM6 333 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Cep85Q8BMK0 761 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Krt25Q8VCW2 446 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Zfp781Q0P5U5 243 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Map3k2Q61083 619 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Retreg2Q6NS82 541 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Fermt2Q8CIB5 680 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Fam217aQ9D9W6 419 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 EsrrgP62509 458 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Zc3h18Q0P678 948 aaKnown RBP18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 HltfQ6PCN7 1003 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Pcdha7Q91Y13 937 aa18.16■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Dnajc14Q921R4 703 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Psma8Q9CWH6 250 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Otud7bB2RUR8 840 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Cnga4Q3UW12 575 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ifit1Q64282 463 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 NelfbQ8C4Y3 580 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Ints4Q8CIM8 964 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 MyripQ8K3I4 856 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Nova2D3YVV7 556 aaKnown RBP18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Esyt2Q3TZZ7 845 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 CtifQ6PEE2 600 aaKnown RBP18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Apol10aQ8CCA5 318 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Atp6v0a2P15920 856 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 FerP70451 823 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Serpinb6Q60854 378 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Me3Q8BMF3 604 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Rsad2Q8CBB9 362 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 A2mQ6GQT1 1474 aa18.15■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Serpini1O35684 410 aa18.14■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Nup58Q8R332 587 aa18.14■□□□□ 0.5
Col17a1-202ENSMUST00000086923 Pik3c2gO70167 1506 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 NemfQ8CCP0 1064 aaKnown RBP18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Tada3Q8R0L9 432 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 A0A1W2P6Q8 802 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gm9048A0A1W2P7H4 802 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 A0A1W2P7S8 802 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 A0A1W2P7Z8 802 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gm9046A0A1W2P855 802 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lonrf2B2RT44 518 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Flot1O08917 428 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cdc5lQ6A068 802 aaKnown RBP18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Armcx6Q8K3A6 301 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lrrc8cQ8R502 803 aa18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Riok3Q9DBU3 519 aaKnown RBP18.14■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lig1P37913 916 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 RragaQ80X95 313 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Flad1Q8R123 492 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Nlrp3Q8R4B8 1033 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Krt75Q8BGZ7 551 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 3830403N18RikQ9D6C3 208 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Slc8a3S4R2P9 928 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Urb2E9Q7L1 1524 aaKnown RBP18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Zfp174B9EJW5 407 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 SbdsP70122 250 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lcmt1A0A0U1RNF2 332 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Speer2E9Q9U2 264 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Mroh9G5E8L9 891 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Pnma3Q8JZW8 466 aa18.13■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gm6121L7MUF1 212 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Hpcal4Q8BGZ1 191 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Chchd3Q9CRB9 227 aaKnown RBP18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Wdr46Q9Z0H1 622 aaKnown RBP18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Sos2Q02384 1333 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Irf9Q61179 399 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cttnbp2nlQ99LJ0 638 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Naa16Q9DBB4 864 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Apol8A2VDH7 339 aaKnown RBP18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Stx2Q00262 289 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Dcaf17Q3TUL7 519 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 PapolbQ9WVP6 641 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Atg4a-psA0A0G2JFS9 396 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Skor2A7M7C7 1008 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gpcpd1Q8C0L9 675 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Atg4aQ8C9S8 396 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Pcdhgc5Q91XW9 944 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Pa2g4P50580 394 aaKnown RBP18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cnnm2Q3TWN3 875 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Slc38a10Q5I012 1090 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Krt39Q6IFX4 482 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Krt74Q6IFZ9 495 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Atp2a1Q8R429 994 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Catsper1Q91ZR5 686 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Trim16Q99PP9 556 aa18.12■□□□□ 0.49
Col17a1-202ENSMUST00000086923 PrphP15331 475 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lrch1P62046 709 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Map3k5O35099 1380 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ttll7A4Q9F0 912 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gm44G3UW88 330 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Hexim1Q8R409 356 aaKnown RBP18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Sh2b1Q91ZM2 756 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Trim7Q923T7 510 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms