RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Gm16253D3Z167 63 aa10.32□□□□□ -0.76
Shroom3-204ENSMUST00000168878 Notch1Q01705 2531 aa10.27□□□□□ -0.76
Shroom3-204ENSMUST00000168878 Prrc2cQ3TLH4 2846 aaKnown RBP10.26□□□□□ -0.77
Shroom3-204ENSMUST00000168878 Spink7Q6IE32 76 aa10.25□□□□□ -0.77
Shroom3-204ENSMUST00000168878 UtrnE9Q6R7 3430 aa10.23□□□□□ -0.77
Shroom3-204ENSMUST00000168878 Gm9508A0A1W2P7W0 230 aa10.22□□□□□ -0.77
Shroom3-204ENSMUST00000168878 Cep350E9Q309 3095 aa10.17□□□□□ -0.78
Shroom3-204ENSMUST00000168878 Prune2Q52KR3 3084 aa10.14□□□□□ -0.79
Shroom3-204ENSMUST00000168878 4933415A04RikQ9D443 101 aa10.14□□□□□ -0.79
Shroom3-204ENSMUST00000168878 Kmt2bO08550 2713 aa10.14□□□□□ -0.79
Shroom3-204ENSMUST00000168878 Krtap15-1Q9QZU5 150 aa10.13□□□□□ -0.79
Shroom3-204ENSMUST00000168878 Gm17349F7BGH6 99 aa10.11□□□□□ -0.79
Shroom3-204ENSMUST00000168878 SmcpP15265 143 aa10.1□□□□□ -0.79
Shroom3-204ENSMUST00000168878 Hectd1Q69ZR2 2618 aaKnown RBP10.09□□□□□ -0.79
Shroom3-204ENSMUST00000168878 1700042G07RikB1AUF7 90 aa10.09□□□□□ -0.79
Shroom3-204ENSMUST00000168878 Krtap29-1A2A5X4 342 aa10.08□□□□□ -0.8
Shroom3-204ENSMUST00000168878 NipblQ6KCD5 2798 aaKnown RBP10.08□□□□□ -0.8
Shroom3-204ENSMUST00000168878 Stab1Q8R4Y4 2571 aa10.07□□□□□ -0.8
Shroom3-204ENSMUST00000168878 Map1aQ9QYR6 2776 aa10.05□□□□□ -0.8
Shroom3-204ENSMUST00000168878 Rpl37Q9D823 97 aa10.04□□□□□ -0.8
Shroom3-204ENSMUST00000168878 Gm36176A0A1W2P8D5 158 aa10.03□□□□□ -0.8
Shroom3-204ENSMUST00000168878 TrioQ0KL02 3102 aa10.02□□□□□ -0.8
Shroom3-204ENSMUST00000168878 Romo1P60603 79 aa10.02□□□□□ -0.81
Shroom3-204ENSMUST00000168878 Camk2n1Q6QWF9 78 aa9.99□□□□□ -0.81
Shroom3-204ENSMUST00000168878 Jbts17Q8CE72 3214 aa9.99□□□□□ -0.81
Shroom3-204ENSMUST00000168878 Akap13E9Q394 2776 aa9.96□□□□□ -0.82
Shroom3-204ENSMUST00000168878 Gm2310J3QNJ2 377 aa9.94□□□□□ -0.82
Shroom3-204ENSMUST00000168878 Tnrc18Q80WC3 2878 aa9.94□□□□□ -0.82
Shroom3-204ENSMUST00000168878 Gm5767A0A0J9YTU8 78 aa9.93□□□□□ -0.82
Shroom3-204ENSMUST00000168878 Fam229aB2KGE5 128 aa9.91□□□□□ -0.82
Shroom3-204ENSMUST00000168878 2310050C09RikG5E8Z3 280 aa9.89□□□□□ -0.83
Shroom3-204ENSMUST00000168878 Lama3Q61789 3330 aa9.88□□□□□ -0.83
Shroom3-204ENSMUST00000168878 Gm10382Q3V0T5 144 aa9.87□□□□□ -0.83
Shroom3-204ENSMUST00000168878 Bod1lE9Q6J5 3032 aa9.86□□□□□ -0.83
Shroom3-204ENSMUST00000168878 Itpr1P11881 2749 aa9.83□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Lama2Q60675 3118 aaKnown RBP9.83□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Sec61bQ9CQS8 96 aaKnown RBP9.83□□□□□ -0.84
Shroom3-204ENSMUST00000168878 BC029722A0A0N4SW31 51 aa9.81□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Krtap13O88375 197 aa9.81□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Chd7A2AJK6 2986 aaKnown RBP9.8□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Mast4Q811L6 2618 aa9.78□□□□□ -0.84
Shroom3-204ENSMUST00000168878 Itpr3P70227 2670 aa9.77□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Ash1lQ99MY8 2958 aa9.74□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Chd6A3KFM7 2711 aa9.74□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Krtap14O08640 167 aa9.74□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Tep1P97499 2629 aa9.74□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Col12a1Q60847 3120 aa9.73□□□□□ -0.85
Shroom3-204ENSMUST00000168878 2310061N02RikQ9D6S9 174 aa9.72□□□□□ -0.85
Shroom3-204ENSMUST00000168878 Ubr5Q80TP3 2792 aa9.7□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Dmxl1Q6PNC0 3013 aa9.69□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Cox6b2Q80ZN9 88 aa9.68□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Gm19426M0QWC7 77 aa9.68□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Mki67E9PVX6 3177 aaKnown RBP9.67□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Fbn2Q61555 2907 aa9.66□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Usp34Q6ZQ93 3582 aa9.66□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Stab2Q8R4U0 2559 aa9.66□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Rps29P62274 56 aa9.66□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Gm9507D3Z5T3 223 aa9.65□□□□□ -0.86
Shroom3-204ENSMUST00000168878 Gm7173A0A0G2JEB6 3132 aa9.63□□□□□ -0.87
Shroom3-204ENSMUST00000168878 Igsf10Q3V1M1 2594 aa9.63□□□□□ -0.87
Shroom3-204ENSMUST00000168878 MgaA2AWL7 3003 aaKnown RBP9.63□□□□□ -0.87
Shroom3-204ENSMUST00000168878 HttP42859 3119 aa9.63□□□□□ -0.87
Shroom3-204ENSMUST00000168878 Myo15bI7HPW8 3033 aa9.63□□□□□ -0.87
Shroom3-204ENSMUST00000168878 Tnp2P11378 117 aa9.61□□□□□ -0.87
Shroom3-204ENSMUST00000168878 9530053A07RikE9PVG8 2581 aa9.6□□□□□ -0.87
Shroom3-204ENSMUST00000168878 Rev3lQ61493 3122 aa9.58□□□□□ -0.88
Shroom3-204ENSMUST00000168878 Ranbp2Q9ERU9 3053 aaKnown RBP9.54□□□□□ -0.88
Shroom3-204ENSMUST00000168878 D6Ertd527eA0A0N4SWI3 464 aa9.52□□□□□ -0.89
Shroom3-204ENSMUST00000168878 Krtap10-4Q08EG8 221 aa9.51□□□□□ -0.89
Shroom3-204ENSMUST00000168878 Cfap54Q8C6S9 3106 aa9.49□□□□□ -0.89
Shroom3-204ENSMUST00000168878 Nbeal2Q6ZQA0 2742 aa9.49□□□□□ -0.89
Shroom3-204ENSMUST00000168878 Pkd1l1Q8R526 2615 aa9.46□□□□□ -0.9
Shroom3-204ENSMUST00000168878 KalrnA2CG49 2964 aa9.45□□□□□ -0.9
Shroom3-204ENSMUST00000168878 Muc2Q80Z19 2680 aa9.38□□□□□ -0.91
Shroom3-204ENSMUST00000168878 Krtap10-10A0A1W2P7T6 217 aa9.37□□□□□ -0.91
Shroom3-204ENSMUST00000168878 Cdh23Q99PF4 3354 aa9.37□□□□□ -0.91
Shroom3-204ENSMUST00000168878 Col6a5A6H584 2640 aa9.37□□□□□ -0.91
Shroom3-204ENSMUST00000168878 Ndufaf8A2AMZ4 74 aa9.31□□□□□ -0.92
Shroom3-204ENSMUST00000168878 TgO08710 2766 aa9.29□□□□□ -0.92
Shroom3-204ENSMUST00000168878 Tex15F8VPN2 2785 aa9.29□□□□□ -0.92
Shroom3-204ENSMUST00000168878 Hivep1Q03172 2688 aa9.28□□□□□ -0.92
Shroom3-204ENSMUST00000168878 Celsr1O35161 3034 aa9.26□□□□□ -0.93
Shroom3-204ENSMUST00000168878 FcgbpE9Q0B5 2583 aa9.23□□□□□ -0.93
Shroom3-204ENSMUST00000168878 Itpr2Q9Z329 2701 aa9.21□□□□□ -0.93
Shroom3-204ENSMUST00000168878 Vps13aQ5H8C4 3166 aa9.2□□□□□ -0.94
Shroom3-204ENSMUST00000168878 Gm21887J3QQ04 176 aa9.2□□□□□ -0.94
Shroom3-204ENSMUST00000168878 Frem2Q6NVD0 3160 aa9.19□□□□□ -0.94
Shroom3-204ENSMUST00000168878 Srrm2Q8BTI8 2703 aaKnown RBP9.15□□□□□ -0.94
Shroom3-204ENSMUST00000168878 Szt2A2A9C3 3431 aa9.15□□□□□ -0.95
Shroom3-204ENSMUST00000168878 Gm2696A0A1W2P709 240 aa9.13□□□□□ -0.95
Shroom3-204ENSMUST00000168878 AtmQ62388 3066 aa9.12□□□□□ -0.95
Shroom3-204ENSMUST00000168878 Utp20Q5XG71 2788 aaKnown RBP9.12□□□□□ -0.95
Shroom3-204ENSMUST00000168878 AspmQ8CJ27 3122 aa9.12□□□□□ -0.95
Shroom3-204ENSMUST00000168878 ApcQ61315 2845 aa9.11□□□□□ -0.95
Shroom3-204ENSMUST00000168878 Gm40193A0A1B0GT39 78 aa9.09□□□□□ -0.95
Shroom3-204ENSMUST00000168878 Unc80Q8BLN6 3261 aa9.07□□□□□ -0.96
Shroom3-204ENSMUST00000168878 Gm20537G3UYK7 97 aa9.06□□□□□ -0.96
Shroom3-204ENSMUST00000168878 BptfA2A654 3036 aaKnown RBP9.03□□□□□ -0.96
Shroom3-204ENSMUST00000168878 Gm5965D3Z724 196 aa9.03□□□□□ -0.96
Shroom3-204ENSMUST00000168878 Lrrc37aB1AWG4 3215 aa9.02□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms