RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Gm19426M0QWC7 77 aa10.51□□□□□ -0.73
Pcf11-201ENSMUST00000119954 Gm36176A0A1W2P8D5 158 aa10.49□□□□□ -0.73
Pcf11-201ENSMUST00000119954 Lelp1Q9DAE3 120 aa10.47□□□□□ -0.73
Pcf11-201ENSMUST00000119954 BC029722A0A0N4SW31 51 aa10.45□□□□□ -0.74
Pcf11-201ENSMUST00000119954 SmcpP15265 143 aa10.39□□□□□ -0.75
Pcf11-201ENSMUST00000119954 Kmt2bO08550 2713 aa10.39□□□□□ -0.75
Pcf11-201ENSMUST00000119954 Gm5767A0A0J9YTU8 78 aa10.38□□□□□ -0.75
Pcf11-201ENSMUST00000119954 Cox6b2Q80ZN9 88 aa10.37□□□□□ -0.75
Pcf11-201ENSMUST00000119954 AtrQ9JKK8 2635 aa10.3□□□□□ -0.76
Pcf11-201ENSMUST00000119954 Gcn1E9PVA8 2671 aaKnown RBP10.29□□□□□ -0.76
Pcf11-201ENSMUST00000119954 Zfp292Q9Z2U2 2698 aa10.29□□□□□ -0.76
Pcf11-201ENSMUST00000119954 Ndufaf8A2AMZ4 74 aa10.28□□□□□ -0.76
Pcf11-201ENSMUST00000119954 FlnbQ80X90 2602 aaKnown RBP10.27□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Gm11565A2A4M7 156 aa10.25□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Notch1Q01705 2531 aa10.24□□□□□ -0.77
Pcf11-201ENSMUST00000119954 2310050C09RikG5E8Z3 280 aa10.23□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Krtap13O88375 197 aa10.23□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Gm9507D3Z5T3 223 aa10.23□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Krtap29-1A2A5X4 342 aa10.22□□□□□ -0.77
Pcf11-201ENSMUST00000119954 Gm2310J3QNJ2 377 aa10.18□□□□□ -0.78
Pcf11-201ENSMUST00000119954 FlnaQ8BTM8 2647 aaKnown RBP10.16□□□□□ -0.78
Pcf11-201ENSMUST00000119954 Krtap10-4Q08EG8 221 aa10.14□□□□□ -0.79
Pcf11-201ENSMUST00000119954 Gm9112A2AI92 75 aa10.08□□□□□ -0.8
Pcf11-201ENSMUST00000119954 Krtap14O08640 167 aa10.05□□□□□ -0.8
Pcf11-201ENSMUST00000119954 Krtap10-10A0A1W2P7T6 217 aa10.04□□□□□ -0.8
Pcf11-201ENSMUST00000119954 Akap13E9Q394 2776 aa10.04□□□□□ -0.8
Pcf11-201ENSMUST00000119954 CenpfE9Q3P4 2997 aaKnown RBP10.03□□□□□ -0.8
Pcf11-201ENSMUST00000119954 Gm9195A0A140LHT4 2805 aa10□□□□□ -0.81
Pcf11-201ENSMUST00000119954 Prrc2cQ3TLH4 2846 aaKnown RBP9.94□□□□□ -0.82
Pcf11-201ENSMUST00000119954 Rps29P62274 56 aa9.92□□□□□ -0.82
Pcf11-201ENSMUST00000119954 UtrnE9Q6R7 3430 aa9.92□□□□□ -0.82
Pcf11-201ENSMUST00000119954 Stab1Q8R4Y4 2571 aa9.9□□□□□ -0.83
Pcf11-201ENSMUST00000119954 Hectd1Q69ZR2 2618 aaKnown RBP9.9□□□□□ -0.83
Pcf11-201ENSMUST00000119954 D6Ertd527eA0A0N4SWI3 464 aa9.88□□□□□ -0.83
Pcf11-201ENSMUST00000119954 Gm21887J3QQ04 176 aa9.87□□□□□ -0.83
Pcf11-201ENSMUST00000119954 Map1aQ9QYR6 2776 aa9.87□□□□□ -0.83
Pcf11-201ENSMUST00000119954 Tnp2P11378 117 aa9.85□□□□□ -0.83
Pcf11-201ENSMUST00000119954 NipblQ6KCD5 2798 aaKnown RBP9.83□□□□□ -0.84
Pcf11-201ENSMUST00000119954 Gm40193A0A1B0GT39 78 aa9.82□□□□□ -0.84
Pcf11-201ENSMUST00000119954 Mast4Q811L6 2618 aa9.8□□□□□ -0.84
Pcf11-201ENSMUST00000119954 Tnp1P10856 55 aa9.77□□□□□ -0.85
Pcf11-201ENSMUST00000119954 Ep400Q8CHI8 3072 aaKnown RBP9.76□□□□□ -0.85
Pcf11-201ENSMUST00000119954 2310057N15RikQ9D6T8 200 aa9.73□□□□□ -0.85
Pcf11-201ENSMUST00000119954 Gm2696A0A1W2P709 240 aa9.7□□□□□ -0.86
Pcf11-201ENSMUST00000119954 9530053A07RikE9PVG8 2581 aa9.69□□□□□ -0.86
Pcf11-201ENSMUST00000119954 Tep1P97499 2629 aa9.68□□□□□ -0.86
Pcf11-201ENSMUST00000119954 Chd6A3KFM7 2711 aa9.67□□□□□ -0.86
Pcf11-201ENSMUST00000119954 Igsf10Q3V1M1 2594 aa9.67□□□□□ -0.86
Pcf11-201ENSMUST00000119954 2310061N02RikQ9D6S9 174 aa9.63□□□□□ -0.87
Pcf11-201ENSMUST00000119954 Usp34Q6ZQ93 3582 aa9.63□□□□□ -0.87
Pcf11-201ENSMUST00000119954 PcntP48725 2898 aa9.6□□□□□ -0.87
Pcf11-201ENSMUST00000119954 Jbts17Q8CE72 3214 aa9.6□□□□□ -0.87
Pcf11-201ENSMUST00000119954 Stab2Q8R4U0 2559 aa9.6□□□□□ -0.87
Pcf11-201ENSMUST00000119954 Dnah12Q3V0Q1 3086 aa9.59□□□□□ -0.87
Pcf11-201ENSMUST00000119954 Cep350E9Q309 3095 aa9.57□□□□□ -0.88
Pcf11-201ENSMUST00000119954 Itpr3P70227 2670 aa9.54□□□□□ -0.88
Pcf11-201ENSMUST00000119954 Gm42715A0A087WP63 3095 aaKnown RBP9.53□□□□□ -0.88
Pcf11-201ENSMUST00000119954 Prune2Q52KR3 3084 aa9.52□□□□□ -0.89
Pcf11-201ENSMUST00000119954 Gm5965D3Z724 196 aa9.51□□□□□ -0.89
Pcf11-201ENSMUST00000119954 Ubr5Q80TP3 2792 aa9.5□□□□□ -0.89
Pcf11-201ENSMUST00000119954 Gm20537G3UYK7 97 aa9.47□□□□□ -0.89
Pcf11-201ENSMUST00000119954 Bod1lE9Q6J5 3032 aa9.37□□□□□ -0.91
Pcf11-201ENSMUST00000119954 Pkd1l1Q8R526 2615 aa9.37□□□□□ -0.91
Pcf11-201ENSMUST00000119954 Lama3Q61789 3330 aa9.36□□□□□ -0.91
Pcf11-201ENSMUST00000119954 Nbeal2Q6ZQA0 2742 aa9.33□□□□□ -0.92
Pcf11-201ENSMUST00000119954 HttP42859 3119 aa9.32□□□□□ -0.92
Pcf11-201ENSMUST00000119954 B930094E09RikQ8C4T2 136 aa9.3□□□□□ -0.92
Pcf11-201ENSMUST00000119954 Prm2P07978 107 aa9.28□□□□□ -0.92
Pcf11-201ENSMUST00000119954 Itpr1P11881 2749 aa9.26□□□□□ -0.93
Pcf11-201ENSMUST00000119954 Col6a5A6H584 2640 aa9.25□□□□□ -0.93
Pcf11-201ENSMUST00000119954 Ash1lQ99MY8 2958 aa9.23□□□□□ -0.93
Pcf11-201ENSMUST00000119954 FcgbpE9Q0B5 2583 aa9.22□□□□□ -0.93
Pcf11-201ENSMUST00000119954 TgO08710 2766 aa9.21□□□□□ -0.94
Pcf11-201ENSMUST00000119954 A930033H14RikG5E8X6 103 aa9.2□□□□□ -0.94
Pcf11-201ENSMUST00000119954 Utp20Q5XG71 2788 aaKnown RBP9.19□□□□□ -0.94
Pcf11-201ENSMUST00000119954 Gm9918Q8BUR5 174 aa9.19□□□□□ -0.94
Pcf11-201ENSMUST00000119954 Dmxl1Q6PNC0 3013 aa9.13□□□□□ -0.95
Pcf11-201ENSMUST00000119954 Tex15F8VPN2 2785 aa9.13□□□□□ -0.95
Pcf11-201ENSMUST00000119954 Cdh23Q99PF4 3354 aa9.1□□□□□ -0.95
Pcf11-201ENSMUST00000119954 TrioQ0KL02 3102 aa9.1□□□□□ -0.95
Pcf11-201ENSMUST00000119954 Srrm2Q8BTI8 2703 aaKnown RBP9.07□□□□□ -0.96
Pcf11-201ENSMUST00000119954 Tnrc18Q80WC3 2878 aa9.04□□□□□ -0.96
Pcf11-201ENSMUST00000119954 MgaA2AWL7 3003 aaKnown RBP9.03□□□□□ -0.96
Pcf11-201ENSMUST00000119954 2310079G19RikQ9D6L6 185 aa9.03□□□□□ -0.96
Pcf11-201ENSMUST00000119954 Mki67E9PVX6 3177 aaKnown RBP9.02□□□□□ -0.96
Pcf11-201ENSMUST00000119954 Szt2A2A9C3 3431 aa9□□□□□ -0.97
Pcf11-201ENSMUST00000119954 Lama2Q60675 3118 aaKnown RBP8.99□□□□□ -0.97
Pcf11-201ENSMUST00000119954 ApcQ61315 2845 aa8.99□□□□□ -0.97
Pcf11-201ENSMUST00000119954 Unc80Q8BLN6 3261 aa8.96□□□□□ -0.98
Pcf11-201ENSMUST00000119954 Fbn2Q61555 2907 aa8.93□□□□□ -0.98
Pcf11-201ENSMUST00000119954 Hivep1Q03172 2688 aa8.93□□□□□ -0.98
Pcf11-201ENSMUST00000119954 Chd7A2AJK6 2986 aaKnown RBP8.92□□□□□ -0.98
Pcf11-201ENSMUST00000119954 Col12a1Q60847 3120 aa8.89□□□□□ -0.99
Pcf11-201ENSMUST00000119954 Rev3lQ61493 3122 aa8.85□□□□□ -0.99
Pcf11-201ENSMUST00000119954 Gm17416Q30KP4 66 aa8.84□□□□□ -0.99
Pcf11-201ENSMUST00000119954 Cfap54Q8C6S9 3106 aa8.83□□□□□ -1
Pcf11-201ENSMUST00000119954 Gm17402F6Z0L5 76 aa8.83□□□□□ -1
Pcf11-201ENSMUST00000119954 Gm9736A0A1W2P7N1 277 aa8.83□□□□□ -1
Pcf11-201ENSMUST00000119954 Itpr2Q9Z329 2701 aa8.82□□□□□ -1
Pcf11-201ENSMUST00000119954 Ranbp2Q9ERU9 3053 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 102.5 ms