RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Gm37013Q8K491 104 aa9.45□□□□□ -0.9
Pcdha9-201ENSMUST00000115659 Hectd1Q69ZR2 2618 aaKnown RBP9.45□□□□□ -0.9
Pcdha9-201ENSMUST00000115659 Pla2g10Q9QXX3 151 aa9.44□□□□□ -0.9
Pcdha9-201ENSMUST00000115659 NipblQ6KCD5 2798 aaKnown RBP9.43□□□□□ -0.9
Pcdha9-201ENSMUST00000115659 Gm3646F6S692 53 aa9.4□□□□□ -0.9
Pcdha9-201ENSMUST00000115659 Gm7137J3QMW1 236 aa9.38□□□□□ -0.91
Pcdha9-201ENSMUST00000115659 Stab1Q8R4Y4 2571 aa9.38□□□□□ -0.91
Pcdha9-201ENSMUST00000115659 Cep350E9Q309 3095 aa9.37□□□□□ -0.91
Pcdha9-201ENSMUST00000115659 Prune2Q52KR3 3084 aa9.36□□□□□ -0.91
Pcdha9-201ENSMUST00000115659 Map1aQ9QYR6 2776 aa9.36□□□□□ -0.91
Pcdha9-201ENSMUST00000115659 Spink7Q6IE32 76 aa9.32□□□□□ -0.92
Pcdha9-201ENSMUST00000115659 Tnrc18Q80WC3 2878 aa9.31□□□□□ -0.92
Pcdha9-201ENSMUST00000115659 Krtap29-1A2A5X4 342 aa9.29□□□□□ -0.92
Pcdha9-201ENSMUST00000115659 Akap13E9Q394 2776 aa9.29□□□□□ -0.92
Pcdha9-201ENSMUST00000115659 Gm17349F7BGH6 99 aa9.28□□□□□ -0.92
Pcdha9-201ENSMUST00000115659 Itpr1P11881 2749 aa9.24□□□□□ -0.93
Pcdha9-201ENSMUST00000115659 4933415A04RikQ9D443 101 aa9.23□□□□□ -0.93
Pcdha9-201ENSMUST00000115659 Krtap15-1Q9QZU5 150 aa9.23□□□□□ -0.93
Pcdha9-201ENSMUST00000115659 Gm9508A0A1W2P7W0 230 aa9.22□□□□□ -0.93
Pcdha9-201ENSMUST00000115659 SmcpP15265 143 aa9.19□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 Rpl37Q9D823 97 aa9.19□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 TrioQ0KL02 3102 aa9.18□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 1700042G07RikB1AUF7 90 aa9.17□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 Mast4Q811L6 2618 aa9.16□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 Chd6A3KFM7 2711 aa9.16□□□□□ -0.94
Pcdha9-201ENSMUST00000115659 Fam229aB2KGE5 128 aa9.14□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Romo1P60603 79 aa9.13□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Gm5767A0A0J9YTU8 78 aa9.13□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Gm36176A0A1W2P8D5 158 aa9.13□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Camk2n1Q6QWF9 78 aa9.11□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Itpr3P70227 2670 aa9.11□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Gm2310J3QNJ2 377 aa9.11□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Sec61bQ9CQS8 96 aaKnown RBP9.09□□□□□ -0.95
Pcdha9-201ENSMUST00000115659 Jbts17Q8CE72 3214 aa9.08□□□□□ -0.96
Pcdha9-201ENSMUST00000115659 Tep1P97499 2629 aa9.08□□□□□ -0.96
Pcdha9-201ENSMUST00000115659 Chd7A2AJK6 2986 aaKnown RBP9.08□□□□□ -0.96
Pcdha9-201ENSMUST00000115659 Myo15bI7HPW8 3033 aa9.04□□□□□ -0.96
Pcdha9-201ENSMUST00000115659 2310050C09RikG5E8Z3 280 aa9.04□□□□□ -0.96
Pcdha9-201ENSMUST00000115659 Stab2Q8R4U0 2559 aa9.02□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Igsf10Q3V1M1 2594 aa9.02□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 BC029722A0A0N4SW31 51 aa9.01□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Ubr5Q80TP3 2792 aa9.01□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 UtrnE9Q6R7 3430 aa9□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Ash1lQ99MY8 2958 aa9□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Rps29P62274 56 aa8.99□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Fbn2Q61555 2907 aa8.98□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Gm10382Q3V0T5 144 aa8.98□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Dmxl1Q6PNC0 3013 aa8.97□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 Bod1lE9Q6J5 3032 aa8.96□□□□□ -0.97
Pcdha9-201ENSMUST00000115659 2310061N02RikQ9D6S9 174 aa8.95□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 9530053A07RikE9PVG8 2581 aa8.95□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 MgaA2AWL7 3003 aaKnown RBP8.94□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 Lama2Q60675 3118 aaKnown RBP8.94□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 Krtap14O08640 167 aa8.93□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 Krtap13O88375 197 aa8.93□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 Cox6b2Q80ZN9 88 aa8.92□□□□□ -0.98
Pcdha9-201ENSMUST00000115659 Col12a1Q60847 3120 aa8.89□□□□□ -0.99
Pcdha9-201ENSMUST00000115659 Tnp2P11378 117 aa8.88□□□□□ -0.99
Pcdha9-201ENSMUST00000115659 Mki67E9PVX6 3177 aaKnown RBP8.88□□□□□ -0.99
Pcdha9-201ENSMUST00000115659 Gm19426M0QWC7 77 aa8.86□□□□□ -0.99
Pcdha9-201ENSMUST00000115659 Pkd1l1Q8R526 2615 aa8.84□□□□□ -0.99
Pcdha9-201ENSMUST00000115659 Gm7173A0A0G2JEB6 3132 aa8.83□□□□□ -1
Pcdha9-201ENSMUST00000115659 Nbeal2Q6ZQA0 2742 aa8.8□□□□□ -1
Pcdha9-201ENSMUST00000115659 KalrnA2CG49 2964 aa8.79□□□□□ -1
Pcdha9-201ENSMUST00000115659 Muc2Q80Z19 2680 aa8.79□□□□□ -1
Pcdha9-201ENSMUST00000115659 Lama3Q61789 3330 aa8.79□□□□□ -1
Pcdha9-201ENSMUST00000115659 Col6a5A6H584 2640 aa8.79□□□□□ -1
Pcdha9-201ENSMUST00000115659 HttP42859 3119 aa8.76□□□□□ -1.01
Pcdha9-201ENSMUST00000115659 Rev3lQ61493 3122 aa8.76□□□□□ -1.01
Pcdha9-201ENSMUST00000115659 Gm9507D3Z5T3 223 aa8.75□□□□□ -1.01
Pcdha9-201ENSMUST00000115659 D6Ertd527eA0A0N4SWI3 464 aa8.71□□□□□ -1.01
Pcdha9-201ENSMUST00000115659 Ranbp2Q9ERU9 3053 aaKnown RBP8.69□□□□□ -1.02
Pcdha9-201ENSMUST00000115659 Hivep1Q03172 2688 aa8.68□□□□□ -1.02
Pcdha9-201ENSMUST00000115659 Cfap54Q8C6S9 3106 aa8.67□□□□□ -1.02
Pcdha9-201ENSMUST00000115659 Tex15F8VPN2 2785 aa8.66□□□□□ -1.02
Pcdha9-201ENSMUST00000115659 FcgbpE9Q0B5 2583 aa8.62□□□□□ -1.03
Pcdha9-201ENSMUST00000115659 TgO08710 2766 aa8.61□□□□□ -1.03
Pcdha9-201ENSMUST00000115659 Itpr2Q9Z329 2701 aa8.61□□□□□ -1.03
Pcdha9-201ENSMUST00000115659 Krtap10-4Q08EG8 221 aa8.59□□□□□ -1.03
Pcdha9-201ENSMUST00000115659 Usp34Q6ZQ93 3582 aa8.53□□□□□ -1.04
Pcdha9-201ENSMUST00000115659 Celsr1O35161 3034 aa8.5□□□□□ -1.05
Pcdha9-201ENSMUST00000115659 Krtap10-10A0A1W2P7T6 217 aa8.47□□□□□ -1.05
Pcdha9-201ENSMUST00000115659 Srrm2Q8BTI8 2703 aaKnown RBP8.47□□□□□ -1.05
Pcdha9-201ENSMUST00000115659 Utp20Q5XG71 2788 aaKnown RBP8.46□□□□□ -1.05
Pcdha9-201ENSMUST00000115659 Vps13aQ5H8C4 3166 aa8.45□□□□□ -1.06
Pcdha9-201ENSMUST00000115659 AspmQ8CJ27 3122 aa8.42□□□□□ -1.06
Pcdha9-201ENSMUST00000115659 ApcQ61315 2845 aa8.41□□□□□ -1.06
Pcdha9-201ENSMUST00000115659 Gm40193A0A1B0GT39 78 aa8.39□□□□□ -1.07
Pcdha9-201ENSMUST00000115659 Gm21887J3QQ04 176 aa8.39□□□□□ -1.07
Pcdha9-201ENSMUST00000115659 Ndufaf8A2AMZ4 74 aa8.39□□□□□ -1.07
Pcdha9-201ENSMUST00000115659 Frem2Q6NVD0 3160 aa8.36□□□□□ -1.07
Pcdha9-201ENSMUST00000115659 Cdh23Q99PF4 3354 aa8.35□□□□□ -1.07
Pcdha9-201ENSMUST00000115659 AtmQ62388 3066 aa8.31□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 Zzef1Q5SSH7 2924 aa8.29□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 Igfn1Q3KNY0 2849 aa8.29□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 Adgrg4B7ZCC9 3073 aa8.28□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 Unc80Q8BLN6 3261 aa8.28□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 Gm2696A0A1W2P709 240 aa8.28□□□□□ -1.08
Pcdha9-201ENSMUST00000115659 NbeaQ9EPN1 2936 aa8.27□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 FrylF8VQ05 3007 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms