RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Prrc2cQ3TLH4 2846 aaKnown RBP10.67□□□□□ -0.7
Col4a3bp-202ENSMUST00000109444 Ankrd11E9Q4F7 2643 aa10.66□□□□□ -0.7
Col4a3bp-202ENSMUST00000109444 Cep350E9Q309 3095 aa10.65□□□□□ -0.7
Col4a3bp-202ENSMUST00000109444 Map1aQ9QYR6 2776 aa10.63□□□□□ -0.71
Col4a3bp-202ENSMUST00000109444 Gm2310J3QNJ2 377 aa10.62□□□□□ -0.71
Col4a3bp-202ENSMUST00000109444 FasnP19096 2504 aaKnown RBP10.57□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 Pla2g10Q9QXX3 151 aa10.56□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 Gm7137J3QMW1 236 aa10.55□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 HrnrQ8VHD8 2496 aa10.55□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 Rpl37Q9D823 97 aa10.53□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 NipblQ6KCD5 2798 aaKnown RBP10.52□□□□□ -0.72
Col4a3bp-202ENSMUST00000109444 Gm17349F7BGH6 99 aa10.52□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Usp24B1AY13 2617 aaKnown RBP10.51□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Romo1P60603 79 aa10.51□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Fn1P11276 2477 aaKnown RBP10.51□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Notch1Q01705 2531 aa10.5□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 AtrQ9JKK8 2635 aa10.49□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Kmt2bO08550 2713 aa10.48□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Spink7Q6IE32 76 aa10.46□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 TrioQ0KL02 3102 aa10.46□□□□□ -0.73
Col4a3bp-202ENSMUST00000109444 Gm9508A0A1W2P7W0 230 aa10.44□□□□□ -0.74
Col4a3bp-202ENSMUST00000109444 Prune2Q52KR3 3084 aa10.42□□□□□ -0.74
Col4a3bp-202ENSMUST00000109444 Hectd1Q69ZR2 2618 aaKnown RBP10.41□□□□□ -0.74
Col4a3bp-202ENSMUST00000109444 Gm5767A0A0J9YTU8 78 aa10.41□□□□□ -0.74
Col4a3bp-202ENSMUST00000109444 Krtap15-1Q9QZU5 150 aa10.41□□□□□ -0.74
Col4a3bp-202ENSMUST00000109444 Chd7A2AJK6 2986 aaKnown RBP10.4□□□□□ -0.75
Col4a3bp-202ENSMUST00000109444 Rps29P62274 56 aa10.37□□□□□ -0.75
Col4a3bp-202ENSMUST00000109444 2310050C09RikG5E8Z3 280 aa10.35□□□□□ -0.75
Col4a3bp-202ENSMUST00000109444 Myo15bI7HPW8 3033 aa10.35□□□□□ -0.75
Col4a3bp-202ENSMUST00000109444 Gm36176A0A1W2P8D5 158 aa10.34□□□□□ -0.75
Col4a3bp-202ENSMUST00000109444 Stab1Q8R4Y4 2571 aa10.31□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 Cox6b2Q80ZN9 88 aa10.31□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 2310061N02RikQ9D6S9 174 aa10.31□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 Gm10382Q3V0T5 144 aa10.29□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 Camk2n1Q6QWF9 78 aa10.29□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 Fam229aB2KGE5 128 aa10.27□□□□□ -0.76
Col4a3bp-202ENSMUST00000109444 Itpr1P11881 2749 aa10.27□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 BC029722A0A0N4SW31 51 aa10.25□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 Sec61bQ9CQS8 96 aaKnown RBP10.25□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 Gm7173A0A0G2JEB6 3132 aa10.25□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 Tnp2P11378 117 aa10.24□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 Krtap14O08640 167 aa10.23□□□□□ -0.77
Col4a3bp-202ENSMUST00000109444 Chd6A3KFM7 2711 aa10.16□□□□□ -0.78
Col4a3bp-202ENSMUST00000109444 Lama3Q61789 3330 aa10.16□□□□□ -0.78
Col4a3bp-202ENSMUST00000109444 Bod1lE9Q6J5 3032 aa10.15□□□□□ -0.78
Col4a3bp-202ENSMUST00000109444 Jbts17Q8CE72 3214 aa10.14□□□□□ -0.79
Col4a3bp-202ENSMUST00000109444 Krtap13O88375 197 aa10.11□□□□□ -0.79
Col4a3bp-202ENSMUST00000109444 Gm19426M0QWC7 77 aa10.1□□□□□ -0.79
Col4a3bp-202ENSMUST00000109444 Itpr3P70227 2670 aa10.09□□□□□ -0.79
Col4a3bp-202ENSMUST00000109444 HttP42859 3119 aa10.07□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Dmxl1Q6PNC0 3013 aa10.07□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 D6Ertd527eA0A0N4SWI3 464 aa10.07□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Fbn2Q61555 2907 aa10.07□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Tep1P97499 2629 aa10.06□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Col12a1Q60847 3120 aa10.06□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Ash1lQ99MY8 2958 aa10.04□□□□□ -0.8
Col4a3bp-202ENSMUST00000109444 Mki67E9PVX6 3177 aaKnown RBP10.02□□□□□ -0.81
Col4a3bp-202ENSMUST00000109444 Mast4Q811L6 2618 aa10.01□□□□□ -0.81
Col4a3bp-202ENSMUST00000109444 Usp34Q6ZQ93 3582 aa10□□□□□ -0.81
Col4a3bp-202ENSMUST00000109444 Akap13E9Q394 2776 aa10□□□□□ -0.81
Col4a3bp-202ENSMUST00000109444 MgaA2AWL7 3003 aaKnown RBP9.99□□□□□ -0.81
Col4a3bp-202ENSMUST00000109444 Stab2Q8R4U0 2559 aa9.96□□□□□ -0.82
Col4a3bp-202ENSMUST00000109444 Rev3lQ61493 3122 aa9.95□□□□□ -0.82
Col4a3bp-202ENSMUST00000109444 Gm9507D3Z5T3 223 aa9.91□□□□□ -0.82
Col4a3bp-202ENSMUST00000109444 Cfap54Q8C6S9 3106 aa9.88□□□□□ -0.83
Col4a3bp-202ENSMUST00000109444 Ranbp2Q9ERU9 3053 aaKnown RBP9.86□□□□□ -0.83
Col4a3bp-202ENSMUST00000109444 KalrnA2CG49 2964 aa9.83□□□□□ -0.84
Col4a3bp-202ENSMUST00000109444 Igsf10Q3V1M1 2594 aa9.82□□□□□ -0.84
Col4a3bp-202ENSMUST00000109444 Ubr5Q80TP3 2792 aa9.8□□□□□ -0.84
Col4a3bp-202ENSMUST00000109444 Muc2Q80Z19 2680 aa9.76□□□□□ -0.85
Col4a3bp-202ENSMUST00000109444 Gm40193A0A1B0GT39 78 aa9.73□□□□□ -0.85
Col4a3bp-202ENSMUST00000109444 TgO08710 2766 aa9.72□□□□□ -0.85
Col4a3bp-202ENSMUST00000109444 Krtap10-4Q08EG8 221 aa9.69□□□□□ -0.86
Col4a3bp-202ENSMUST00000109444 9530053A07RikE9PVG8 2581 aa9.69□□□□□ -0.86
Col4a3bp-202ENSMUST00000109444 Ndufaf8A2AMZ4 74 aa9.67□□□□□ -0.86
Col4a3bp-202ENSMUST00000109444 Itpr2Q9Z329 2701 aa9.63□□□□□ -0.87
Col4a3bp-202ENSMUST00000109444 A930033H14RikG5E8X6 103 aa9.62□□□□□ -0.87
Col4a3bp-202ENSMUST00000109444 Nbeal2Q6ZQA0 2742 aa9.61□□□□□ -0.87
Col4a3bp-202ENSMUST00000109444 Pkd1l1Q8R526 2615 aa9.59□□□□□ -0.87
Col4a3bp-202ENSMUST00000109444 Col6a5A6H584 2640 aa9.58□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Vps13aQ5H8C4 3166 aa9.57□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Utp20Q5XG71 2788 aaKnown RBP9.57□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Gm20537G3UYK7 97 aa9.56□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Gm21887J3QQ04 176 aa9.56□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 AtmQ62388 3066 aa9.56□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Krtap10-10A0A1W2P7T6 217 aa9.54□□□□□ -0.88
Col4a3bp-202ENSMUST00000109444 Cdh23Q99PF4 3354 aa9.52□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 Hivep1Q03172 2688 aa9.51□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 Celsr1O35161 3034 aa9.5□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 2310079G19RikQ9D6L6 185 aa9.49□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 ApcQ61315 2845 aa9.49□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 Srrm2Q8BTI8 2703 aaKnown RBP9.49□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 FcgbpE9Q0B5 2583 aa9.48□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 BptfA2A654 3036 aaKnown RBP9.48□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 Tex15F8VPN2 2785 aa9.48□□□□□ -0.89
Col4a3bp-202ENSMUST00000109444 AspmQ8CJ27 3122 aa9.42□□□□□ -0.9
Col4a3bp-202ENSMUST00000109444 Tnp1P10856 55 aa9.39□□□□□ -0.91
Col4a3bp-202ENSMUST00000109444 Szt2A2A9C3 3431 aa9.38□□□□□ -0.91
Col4a3bp-202ENSMUST00000109444 Adgrg4B7ZCC9 3073 aa9.36□□□□□ -0.91
Col4a3bp-202ENSMUST00000109444 Gm2696A0A1W2P709 240 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms